Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC012400.1-201ENST00000518452 381 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 IGKV2-23-201ENST00000518729 323 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AL163952.1-202ENST00000569625 600 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AC016839.1-201ENST00000578162 867 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 MTND3P19-201ENST00000603825 345 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AC024941.1-201ENST00000612250 334 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 STMN1P1-201ENST00000617809 440 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AC024595.1-201ENST00000623088 387 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AC034229.5-201ENST00000624258 185 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AC000095.2-202ENST00000637415 154 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 CDC27P2-201ENST00000425026 1922 ntBASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.27□□□□□ -1.41
SMC1BQ8NDV3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AP005435.3-201ENST00000531260 3198 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AP001284.1-201ENST00000528393 2118 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC104454.1-201ENST00000421341 1401 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 GTF2H2B-203ENST00000508065 1432 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 ENSAP3-201ENST00000312710 333 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 RNU6-353P-201ENST00000364266 108 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 MIR1182-201ENST00000408363 97 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 RNF10P1-201ENST00000418589 369 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 MFSD13B-201ENST00000420133 1290 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 FTH1P16-201ENST00000435241 552 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 CACYBPP1-201ENST00000438592 684 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 EXTL2P1-201ENST00000446218 416 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 USP9YP25-201ENST00000457708 443 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 RNU7-140P-201ENST00000459546 60 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC104687.1-201ENST00000485829 412 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 GAPDHP56-201ENST00000506031 988 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 MTCO3P15-201ENST00000526563 574 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AP001542.2-201ENST00000593141 364 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 ZNF92P3-201ENST00000596594 954 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC093765.1-201ENST00000603758 881 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AL356218.2-201ENST00000605264 187 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 MIR6716-201ENST00000613413 80 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AL162574.1-201ENST00000615702 950 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC067931.1-201ENST00000624190 671 ntBASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SMC1BQ8NDV3 AC139713.2-214ENST00000642059 1811 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 U3.3-201ENST00000362986 216 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNU6-1320P-201ENST00000390838 107 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 RNU6-1269P-201ENST00000391139 107 ntBASIC6.25□□□□□ -1.41
SMC1BQ8NDV3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms