Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 TAF9P2-201ENST00000454958 515 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 NDUFA12P1-201ENST00000455914 406 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 SUMO2P4-201ENST00000504193 276 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 MTND5P13-201ENST00000513046 1079 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 RN7SKP260-201ENST00000516907 149 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC007115.1-201ENST00000546853 234 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC002400.1-201ENST00000569310 726 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL590229.1-201ENST00000603497 542 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC009237.15-201ENST00000610252 501 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL627230.1-201ENST00000613077 211 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL591926.8-201ENST00000616876 211 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AL121890.3-201ENST00000618494 516 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 MIR7703-201ENST00000620784 77 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC012414.7-202ENST00000622705 1090 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.41□□□□□ -1.54
SLC44A3Q8N4M1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 MTND5P29-201ENST00000458676 1807 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 ICE2P1-201ENST00000512800 1849 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC079741.1-201ENST00000321498 212 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 RPS16P5-201ENST00000406501 404 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC022028.1-201ENST00000412054 408 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL445213.1-201ENST00000412589 747 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 HIGD1AP12-201ENST00000427832 281 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC016712.1-201ENST00000431088 378 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 RHOT1P3-201ENST00000436571 331 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL360221.1-201ENST00000445989 335 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 KNOP1P3-201ENST00000446933 426 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 RN7SL385P-201ENST00000468873 276 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AP000797.2-201ENST00000475768 606 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC140172.1-201ENST00000502928 141 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 MTND3P5-201ENST00000512798 333 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 NPM1P21-201ENST00000513394 762 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC105185.1-201ENST00000518705 535 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 RPL12P22-201ENST00000519073 490 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 VN1R90P-201ENST00000595717 726 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL021997.1-201ENST00000605757 193 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AL031667.3-201ENST00000620124 655 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 OR1S1-201ENST00000624470 978 ntBASIC5.4□□□□□ -1.54
SLC44A3Q8N4M1 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A3Q8N4M1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.4□□□□□ -1.55
SLC44A3Q8N4M1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC44A3Q8N4M1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SLC44A3Q8N4M1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
SLC44A3Q8N4M1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms