Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RPS10P20-201ENST00000494130 463 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC091885.1-201ENST00000506658 268 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC011921.2-201ENST00000589465 152 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AL390838.2-201ENST00000602394 274 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 uc_338.15-201ENST00000615470 191 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 SAMMSON-210ENST00000641260 1308 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 RACGAP1P-201ENST00000550663 1879 ntBASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
NPAS3Q8IXF0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AP003175.1-201ENST00000641383 6658 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AL512646.1-201ENST00000269395 1077 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RPL7P26-201ENST00000333817 754 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RNU6-770P-201ENST00000363929 105 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MRPS6P2-201ENST00000381143 370 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RNU6-1032P-201ENST00000384100 107 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RNU6-831P-201ENST00000384548 107 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RNU6-1263P-201ENST00000384601 106 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MIR188-201ENST00000385034 86 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 Y_RNA.608-201ENST00000410647 95 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AL663061.1-201ENST00000416625 580 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MCFD2P1-201ENST00000417812 300 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AL137014.1-201ENST00000420490 1226 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 USP24P1-201ENST00000433802 779 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 TXNP1-201ENST00000441872 371 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AL353898.1-201ENST00000444055 238 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AL035666.1-201ENST00000446195 348 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 DEFA11P-201ENST00000446470 261 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 COX4I1P2-201ENST00000447446 547 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 COX6CP18-201ENST00000448769 222 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RNU6-261P-201ENST00000459506 102 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MTND5P4-201ENST00000514978 288 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 Y_RNA.680-201ENST00000516441 93 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC008429.4-201ENST00000521201 182 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 KCTD9P6-201ENST00000522306 950 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RPL3P13-201ENST00000550415 216 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MIR4502-201ENST00000580432 81 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC004805.3-201ENST00000603178 310 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC107871.2-201ENST00000612894 502 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC009161.2-201ENST00000624626 138 ntBASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NPAS3Q8IXF0 NBPF8-201ENST00000583271 5330 ntBASIC6.92□□□□□ -1.3
NPAS3Q8IXF0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms