Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 RNU5E-5P-201ENST00000365379 116 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 RNU5A-6P-201ENST00000384136 116 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 VN1R8P-201ENST00000407739 893 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 UBE2V1P14-201ENST00000415815 558 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC104651.1-201ENST00000427559 735 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 MTND1P2-201ENST00000430604 821 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC122718.1-201ENST00000439448 744 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 RPL23AP16-201ENST00000441715 421 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 SNRPEP8-201ENST00000442866 260 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 DNAJC19P5-201ENST00000443295 316 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 EEF1E1P1-201ENST00000446998 430 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL445466.1-201ENST00000448432 357 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC023141.9-201ENST00000458734 412 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 snoU109.1-201ENST00000459339 135 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 OR9M1P-201ENST00000459641 921 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 FAM133DP-201ENST00000464802 691 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL122020.1-201ENST00000472287 459 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 RN7SL177P-201ENST00000476596 299 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC096751.1-202ENST00000502691 1067 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC008429.4-201ENST00000521201 182 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL389895.1-201ENST00000554127 252 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL136131.3-201ENST00000607600 188 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AL352984.2-201ENST00000611153 546 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AP000756.2-201ENST00000624168 2567 ntBASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS4Q8IUM7 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 OR13C1P-202ENST00000641378 2919 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 SPATA31C1-201ENST00000420021 3895 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 RNU6-921P-201ENST00000384361 107 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 HMGB1P17-201ENST00000403495 628 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 AL078604.1-201ENST00000404609 466 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 RPS3AP2-201ENST00000407190 754 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 MTCO1P17-201ENST00000411522 491 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 HMGN1P14-201ENST00000412459 517 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 OFD1P18Y-201ENST00000420889 959 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 AC096632.1-201ENST00000427395 310 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 TUBB4BP6-201ENST00000437576 479 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 SKP1P1-201ENST00000438081 489 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 CNOT7P2-201ENST00000441051 832 ntBASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.63□□□□□ -1.35
NPAS4Q8IUM7 RPL36AP39-201ENST00000445859 318 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms