Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRKDCP78527 SNORA80A-201ENST00000363922 136 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 FCF1P5-201ENST00000406490 482 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 RNA5SP306-201ENST00000411087 107 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKDCP78527 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKDCP78527 CYCSP30-201ENST00000546447 172 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.9□□□□□ -1.95
PRKDCP78527 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKDCP78527 AL160290.3-201ENST00000604869 165 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 MIR7106-201ENST00000612419 65 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.9□□□□□ -1.95
PRKDCP78527 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PRKDCP78527 AC006058.1-201ENST00000568686 5067 ntBASIC2.9□□□□□ -1.95
PRKDCP78527 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 AL353743.1-202ENST00000431724 1695 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKDCP78527 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PRKDCP78527 SNORA70.6-201ENST00000383934 134 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 RNA5SP80-201ENST00000410475 111 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 RNA5SP120-201ENST00000410900 112 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 AC007738.1-201ENST00000413892 348 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 AC073063.1-201ENST00000434352 607 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 AL133162.1-201ENST00000463228 453 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC2.89□□□□□ -1.95
PRKDCP78527 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 DEFB109D-201ENST00000529497 240 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKDCP78527 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKDCP78527 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 ARF4P3-201ENST00000397387 509 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 AC073387.1-201ENST00000453261 709 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 RPL21P13-201ENST00000488305 481 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKDCP78527 AC139783.2-201ENST00000504847 1145 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKDCP78527 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC2.89□□□□□ -1.95
PRKDCP78527 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.89□□□□□ -1.95
PRKDCP78527 RPL12P50-201ENST00000603116 116 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 AL359922.3-201ENST00000624779 1670 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PRKDCP78527 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 OOSP1P1-201ENST00000423265 274 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 RNU6-237P-201ENST00000515985 71 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 RERGL-202ENST00000536890 367 ntTSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
PRKDCP78527 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PRKDCP78527 AC092435.3-201ENST00000565538 3654 ntBASIC2.89□□□□□ -1.95
PRKDCP78527 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PRKDCP78527 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PRKDCP78527 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
PRKDCP78527 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 SNORA38.1-201ENST00000364172 131 ntBASIC2.88□□□□□ -1.95
PRKDCP78527 Z75741.1-201ENST00000446793 314 ntBASIC2.88□□□□□ -1.95
PRKDCP78527 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.88□□□□□ -1.95
PRKDCP78527 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
PRKDCP78527 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PRKDCP78527 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PRKDCP78527 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
PRKDCP78527 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PRKDCP78527 AP001273.1-201ENST00000624493 3152 ntBASIC2.88□□□□□ -1.95
PRKDCP78527 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.88□□□□□ -1.95
PRKDCP78527 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.88□□□□□ -1.95
PRKDCP78527 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PRKDCP78527 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms