Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC023575.1-201ENST00000580510 358 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AC069061.3-201ENST00000582254 823 ntBASIC3.82□□□□□ -1.8
UBA52P62987 KPNA2P3-201ENST00000584190 848 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AC103792.1-201ENST00000603591 919 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AC087468.1-201ENST00000604365 630 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AL121932.1-201ENST00000605542 214 ntBASIC3.82□□□□□ -1.8
UBA52P62987 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.82□□□□□ -1.8
UBA52P62987 AC078899.5-201ENST00000612475 178 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AL022401.1-201ENST00000619498 108 ntBASIC3.82□□□□□ -1.8
UBA52P62987 AC068724.3-201ENST00000625906 87 ntBASIC3.82□□□□□ -1.8
UBA52P62987 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.82□□□□□ -1.8
UBA52P62987 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.82□□□□□ -1.8
UBA52P62987 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.82□□□□□ -1.8
UBA52P62987 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBA52P62987 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBA52P62987 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBA52P62987 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 AL627171.1-201ENST00000618845 1308 ntBASIC3.81□□□□□ -1.8
UBA52P62987 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBA52P62987 AL078604.1-201ENST00000404609 466 ntBASIC3.81□□□□□ -1.8
UBA52P62987 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.81□□□□□ -1.8
UBA52P62987 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.81□□□□□ -1.8
UBA52P62987 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.81□□□□□ -1.8
UBA52P62987 NUTF2P7-201ENST00000453086 375 ntBASIC3.81□□□□□ -1.8
UBA52P62987 AC109327.1-201ENST00000471666 403 ntBASIC3.81□□□□□ -1.8
UBA52P62987 AC091868.1-201ENST00000508746 304 ntBASIC3.81□□□□□ -1.8
UBA52P62987 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.81□□□□□ -1.8
UBA52P62987 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.81□□□□□ -1.8
UBA52P62987 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.81□□□□□ -1.8
UBA52P62987 BNIP3P5-201ENST00000562290 498 ntBASIC3.81□□□□□ -1.8
UBA52P62987 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.81□□□□□ -1.8
UBA52P62987 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 MIR5699-201ENST00000578903 90 ntBASIC3.81□□□□□ -1.8
UBA52P62987 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
UBA52P62987 MIR6716-201ENST00000613413 80 ntBASIC3.81□□□□□ -1.8
UBA52P62987 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.81□□□□□ -1.8
UBA52P62987 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.81□□□□□ -1.8
UBA52P62987 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBA52P62987 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBA52P62987 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
UBA52P62987 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.81□□□□□ -1.8
UBA52P62987 LINC02471-203ENST00000641941 4752 ntBASIC3.8□□□□□ -1.8
UBA52P62987 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 SMG1P6-201ENST00000532337 2930 ntBASIC3.8□□□□□ -1.8
UBA52P62987 AC093535.2-201ENST00000624769 2326 ntBASIC3.8□□□□□ -1.8
UBA52P62987 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
UBA52P62987 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.8□□□□□ -1.8
UBA52P62987 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 RN7SKP267-201ENST00000410381 285 ntBASIC3.8□□□□□ -1.8
UBA52P62987 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
UBA52P62987 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.8□□□□□ -1.8
UBA52P62987 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.8□□□□□ -1.8
UBA52P62987 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.8□□□□□ -1.8
UBA52P62987 AC079804.1-201ENST00000461922 436 ntBASIC3.8□□□□□ -1.8
UBA52P62987 AC020898.1-201ENST00000474167 787 ntBASIC3.8□□□□□ -1.8
UBA52P62987 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.8□□□□□ -1.8
UBA52P62987 PDCD5P1-201ENST00000543528 309 ntBASIC3.8□□□□□ -1.8
UBA52P62987 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.8□□□□□ -1.8
UBA52P62987 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.8□□□□□ -1.8
UBA52P62987 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.8□□□□□ -1.8
UBA52P62987 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 AL035461.2-201ENST00000619201 524 ntBASIC3.8□□□□□ -1.8
UBA52P62987 AC091905.2-201ENST00000623143 306 ntBASIC3.8□□□□□ -1.8
UBA52P62987 AL049536.1-201ENST00000625043 744 ntBASIC3.8□□□□□ -1.8
UBA52P62987 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
UBA52P62987 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.8□□□□□ -1.8
UBA52P62987 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBA52P62987 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.79□□□□□ -1.8
UBA52P62987 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBA52P62987 MAPK10-253ENST00000641010 4072 ntBASIC3.79□□□□□ -1.8
UBA52P62987 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
UBA52P62987 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms