Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LMO4P61968 AC073869.10-201ENST00000642016 354 ntBASIC3.98□□□□□ -1.77
LMO4P61968 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 AL121839.2-201ENST00000565058 6943 ntBASIC3.98□□□□□ -1.77
LMO4P61968 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.98□□□□□ -1.77
LMO4P61968 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
LMO4P61968 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.98□□□□□ -1.77
LMO4P61968 AC133552.1-201ENST00000569988 4007 ntBASIC3.98□□□□□ -1.77
LMO4P61968 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 AL442639.1-201ENST00000625030 1899 ntBASIC3.97□□□□□ -1.77
LMO4P61968 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMO4P61968 MIR133A2-201ENST00000347538 102 ntBASIC3.97□□□□□ -1.77
LMO4P61968 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 RNU6-225P-201ENST00000384613 103 ntBASIC3.97□□□□□ -1.77
LMO4P61968 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 AC096533.1-201ENST00000411645 353 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC107081.1-201ENST00000414975 361 ntBASIC3.97□□□□□ -1.77
LMO4P61968 LUZP4P1-201ENST00000415420 344 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC079809.1-201ENST00000415468 276 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC013429.2-201ENST00000418798 781 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC009480.2-201ENST00000422916 432 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC092162.1-201ENST00000432828 434 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AL035246.1-201ENST00000433554 1255 ntBASIC3.97□□□□□ -1.77
LMO4P61968 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 CASP3P1-201ENST00000446037 609 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 AC073073.1-201ENST00000493920 463 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AK3P4-201ENST00000504283 583 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 SUMO2P5-201ENST00000506790 245 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC091868.1-201ENST00000508746 304 ntBASIC3.97□□□□□ -1.77
LMO4P61968 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 AC108120.2-201ENST00000512973 294 ntBASIC3.97□□□□□ -1.77
LMO4P61968 RNU1-6P-201ENST00000516290 144 ntBASIC3.97□□□□□ -1.77
LMO4P61968 HIGD1AP18-201ENST00000520730 278 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC010376.1-201ENST00000522101 334 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 NOP56P3-201ENST00000549457 385 ntBASIC3.97□□□□□ -1.77
LMO4P61968 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.97□□□□□ -1.77
LMO4P61968 AGGF1P9-201ENST00000561884 913 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC021483.2-201ENST00000567415 758 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 AC023824.3-201ENST00000569003 562 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 AC008088.1-201ENST00000580993 280 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.97□□□□□ -1.77
LMO4P61968 AL606834.3-201ENST00000602615 496 ntBASIC3.97□□□□□ -1.77
LMO4P61968 GAS5-AS1-201ENST00000602767 694 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC080013.6-201ENST00000606185 215 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AP005229.2-201ENST00000609980 697 ntBASIC3.97□□□□□ -1.77
LMO4P61968 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC012414.7-202ENST00000622705 1090 ntBASIC3.97□□□□□ -1.77
LMO4P61968 AC004943.3-201ENST00000624116 600 ntBASIC3.97□□□□□ -1.77
LMO4P61968 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
LMO4P61968 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.97□□□□□ -1.77
LMO4P61968 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMO4P61968 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
LMO4P61968 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LMO4P61968 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
LMO4P61968 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
LMO4P61968 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
LMO4P61968 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
LMO4P61968 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LMO4P61968 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMO4P61968 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms