Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 HAUS1P3-201ENST00000523909 662 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AC138701.1-201ENST00000524329 714 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LIMK1P53667 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.92□□□□□ -1.62
LIMK1P53667 AC007224.1-201ENST00000564410 144 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 MTND4LP25-201ENST00000570218 163 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 ZNF92P2-201ENST00000600543 1059 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AL158211.2-201ENST00000607282 395 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AC123768.4-201ENST00000616244 701 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 CR381572.2-201ENST00000624852 397 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 AP000720.1-201ENST00000625091 483 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
LIMK1P53667 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LIMK1P53667 AL031595.2-201ENST00000624215 19071 ntBASIC4.92□□□□□ -1.62
LIMK1P53667 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LIMK1P53667 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.91□□□□□ -1.62
LIMK1P53667 MAPK10-349ENST00000641767 3661 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.91□□□□□ -1.62
LIMK1P53667 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 RNU1-64P-201ENST00000365443 163 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 OR6K3-202ENST00000368146 996 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.91□□□□□ -1.62
LIMK1P53667 AL138785.1-201ENST00000425821 331 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 HMGB1P5-202ENST00000451497 985 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.91□□□□□ -1.62
LIMK1P53667 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 AC010618.1-201ENST00000469924 477 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC022034.3-201ENST00000471393 478 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 RPS12P31-201ENST00000491419 398 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 RNA5SP360-201ENST00000516555 118 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC022360.1-201ENST00000521058 340 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC012339.2-201ENST00000523996 453 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.91□□□□□ -1.62
LIMK1P53667 OR4R2P-201ENST00000530815 597 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.91□□□□□ -1.62
LIMK1P53667 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.91□□□□□ -1.62
LIMK1P53667 AP005119.2-201ENST00000579735 1105 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC244107.2-201ENST00000611773 76 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AC084824.5-201ENST00000612009 413 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 AP004607.9-201ENST00000618202 316 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.91□□□□□ -1.62
LIMK1P53667 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.91□□□□□ -1.62
LIMK1P53667 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.91□□□□□ -1.62
LIMK1P53667 AP001273.1-201ENST00000624493 3152 ntBASIC4.91□□□□□ -1.62
LIMK1P53667 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LIMK1P53667 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.91□□□□□ -1.62
LIMK1P53667 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LIMK1P53667 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LIMK1P53667 AL137100.1-201ENST00000556703 1620 ntBASIC4.9□□□□□ -1.62
LIMK1P53667 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
LIMK1P53667 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LIMK1P53667 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LIMK1P53667 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIMK1P53667 IGKV7-3-201ENST00000357453 298 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIMK1P53667 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.9□□□□□ -1.63
LIMK1P53667 RNU4-31P-201ENST00000384211 141 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 MIR142-201ENST00000384835 87 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LIMK1P53667 AL049697.2-201ENST00000403708 294 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 PTGES3P2-201ENST00000407942 482 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.9□□□□□ -1.63
LIMK1P53667 AF186996.5-201ENST00000418098 904 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 GAPDHP49-201ENST00000421421 961 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AL732292.1-201ENST00000426692 226 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.9□□□□□ -1.63
LIMK1P53667 IGHV5-78-201ENST00000450948 295 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AC013356.1-201ENST00000489027 564 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.9□□□□□ -1.63
LIMK1P53667 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
LIMK1P53667 AC113430.1-201ENST00000506872 718 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.9□□□□□ -1.63
LIMK1P53667 HMGN1P9-201ENST00000515212 298 ntBASIC4.9□□□□□ -1.63
LIMK1P53667 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms