Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.04□□□□□ -1.76
HCFC1P51610 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.04□□□□□ -1.76
HCFC1P51610 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC1P51610 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC1P51610 SCARNA15-201ENST00000607520 4325 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC1P51610 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC1P51610 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC1P51610 TMSB10P2-201ENST00000416049 131 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.04□□□□□ -1.76
HCFC1P51610 AL389915.1-201ENST00000422463 466 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 MTCO1P51-201ENST00000427672 1060 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC1P51610 ATP5G1P3-201ENST00000463301 410 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AC092902.1-201ENST00000486999 259 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC1P51610 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC1P51610 MTATP6P9-201ENST00000515039 680 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AC110760.3-202ENST00000515177 371 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 RNU6-1334P-201ENST00000516032 105 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 FTH1P11-201ENST00000517577 551 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC1P51610 AC138832.1-201ENST00000522871 556 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.04□□□□□ -1.76
HCFC1P51610 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HCFC1P51610 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.04□□□□□ -1.76
HCFC1P51610 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC1P51610 MTATP6P2-201ENST00000603319 678 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.04□□□□□ -1.76
HCFC1P51610 AC090912.3-201ENST00000609775 533 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 MIR1264-201ENST00000616374 69 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AC091046.2-201ENST00000620775 665 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AL023881.1-201ENST00000621088 301 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 OR4G3P-201ENST00000633500 913 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 AC021242.1-201ENST00000507315 2035 ntBASIC4.04□□□□□ -1.76
HCFC1P51610 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HCFC1P51610 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.03□□□□□ -1.76
HCFC1P51610 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
HCFC1P51610 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.03□□□□□ -1.76
HCFC1P51610 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.03□□□□□ -1.76
HCFC1P51610 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.03□□□□□ -1.76
HCFC1P51610 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 AL445189.1-201ENST00000405722 338 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC1P51610 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC1P51610 RPL7P33-201ENST00000444159 742 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 RPL31P20-201ENST00000449593 360 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.03□□□□□ -1.76
HCFC1P51610 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC1P51610 AP000942.1-201ENST00000463969 747 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.03□□□□□ -1.76
HCFC1P51610 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC1P51610 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.03□□□□□ -1.76
HCFC1P51610 AC093014.1-201ENST00000548926 724 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC1P51610 AC093510.2-201ENST00000562820 896 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 AC023762.1-201ENST00000603280 584 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 QTRT1P1-201ENST00000604344 1078 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 AL049536.1-201ENST00000625043 744 ntBASIC4.03□□□□□ -1.76
HCFC1P51610 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC1P51610 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
HCFC1P51610 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HCFC1P51610 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC1P51610 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCFC1P51610 GCNT6-201ENST00000379591 934 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 RN7SKP97-201ENST00000410966 333 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 E2F6P2-201ENST00000420708 748 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCFC1P51610 AC073310.1-201ENST00000423226 1033 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 OR2AH1P-201ENST00000425717 928 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC1P51610 RRM2P4-201ENST00000441721 562 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC1P51610 MTND2P6-201ENST00000455337 1030 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 AP002345.1-201ENST00000456493 928 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 snoU109.3-201ENST00000459477 145 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 RPS4XP12-201ENST00000461747 709 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 RN7SL98P-201ENST00000462271 300 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC1P51610 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC1P51610 RN7SL558P-201ENST00000497468 299 ntBASIC4.02□□□□□ -1.77
HCFC1P51610 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC1P51610 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC1P51610 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC1P51610 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC1P51610 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC1P51610 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC1P51610 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC1P51610 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC1P51610 MIR4286-201ENST00000580651 93 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms