Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 Y_RNA.472-201ENST00000384322 102 ntBASIC6.17□□□□□ -1.42
MRE11P49959 MIR765-201ENST00000390226 114 ntBASIC6.17□□□□□ -1.42
MRE11P49959 RNU2-17P-201ENST00000410290 190 ntBASIC6.17□□□□□ -1.42
MRE11P49959 RNU4-72P-201ENST00000410754 173 ntBASIC6.17□□□□□ -1.42
MRE11P49959 RPL35AP24-201ENST00000413846 330 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC007161.1-204ENST00000423039 460 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 AC012075.1-201ENST00000436549 580 ntBASIC6.17□□□□□ -1.42
MRE11P49959 RPL35AP21-201ENST00000437667 333 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 MTND2P4-201ENST00000445034 1004 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AL096803.2-201ENST00000450032 677 ntBASIC6.17□□□□□ -1.42
MRE11P49959 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.17□□□□□ -1.42
MRE11P49959 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.17□□□□□ -1.42
MRE11P49959 RPL7P39-201ENST00000481157 744 ntBASIC6.17□□□□□ -1.42
MRE11P49959 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 AC008494.2-201ENST00000514544 370 ntBASIC6.17□□□□□ -1.42
MRE11P49959 RN7SKP46-201ENST00000515942 234 ntBASIC6.17□□□□□ -1.42
MRE11P49959 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 NDUFS5P6-201ENST00000529136 295 ntBASIC6.17□□□□□ -1.42
MRE11P49959 PCNAP4-201ENST00000532690 730 ntBASIC6.17□□□□□ -1.42
MRE11P49959 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 DUX4L52-201ENST00000549363 777 ntBASIC6.17□□□□□ -1.42
MRE11P49959 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.17□□□□□ -1.42
MRE11P49959 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 AC021483.2-201ENST00000567415 758 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 MIR4789-201ENST00000577469 82 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 RBM22P1-201ENST00000578589 1214 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.17□□□□□ -1.42
MRE11P49959 MIR4776-2-201ENST00000580204 80 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC103987.3-201ENST00000582071 292 ntBASIC6.17□□□□□ -1.42
MRE11P49959 MIR4480-201ENST00000582492 71 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.17□□□□□ -1.42
MRE11P49959 RN7SL622P-201ENST00000585292 275 ntBASIC6.17□□□□□ -1.42
MRE11P49959 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 AC025175.1-201ENST00000606482 759 ntBASIC6.17□□□□□ -1.42
MRE11P49959 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 AC010975.3-201ENST00000618727 978 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AL133370.2-201ENST00000619934 439 ntBASIC6.17□□□□□ -1.42
MRE11P49959 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
MRE11P49959 AC016717.3-201ENST00000624730 554 ntBASIC6.17□□□□□ -1.42
MRE11P49959 AC092184.1-201ENST00000625042 715 ntBASIC6.17□□□□□ -1.42
MRE11P49959 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 AC099654.6-201ENST00000636487 512 ntBASIC6.17□□□□□ -1.42
MRE11P49959 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
MRE11P49959 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 MT-RNR2-201ENST00000387347 1559 ntBASIC6.17□□□□□ -1.42
MRE11P49959 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MRE11P49959 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MRE11P49959 MAPK10-349ENST00000641767 3661 ntBASIC6.17□□□□□ -1.42
MRE11P49959 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
MRE11P49959 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
MRE11P49959 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
MRE11P49959 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
MRE11P49959 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
MRE11P49959 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
MRE11P49959 HMGB1P10-201ENST00000395823 563 ntBASIC6.16□□□□□ -1.42
MRE11P49959 CYB5AP4-201ENST00000396692 399 ntBASIC6.16□□□□□ -1.42
MRE11P49959 AL035419.1-201ENST00000397037 564 ntBASIC6.16□□□□□ -1.42
MRE11P49959 Y_RNA.599-201ENST00000410489 109 ntBASIC6.16□□□□□ -1.42
MRE11P49959 RN7SKP29-201ENST00000410957 272 ntBASIC6.16□□□□□ -1.42
MRE11P49959 RAP1BP1-201ENST00000412709 553 ntBASIC6.16□□□□□ -1.42
MRE11P49959 TIMM9P2-201ENST00000419324 266 ntBASIC6.16□□□□□ -1.42
MRE11P49959 EIF4A1P1-201ENST00000420241 934 ntBASIC6.16□□□□□ -1.42
MRE11P49959 AC245028.1-201ENST00000423259 256 ntBASIC6.16□□□□□ -1.42
MRE11P49959 PNRC2P1-201ENST00000423940 420 ntBASIC6.16□□□□□ -1.42
MRE11P49959 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.16□□□□□ -1.42
MRE11P49959 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.16□□□□□ -1.42
MRE11P49959 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.16□□□□□ -1.42
MRE11P49959 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.16□□□□□ -1.42
MRE11P49959 SEPT7P3-201ENST00000455017 621 ntBASIC6.16□□□□□ -1.42
MRE11P49959 USP9YP25-201ENST00000457708 443 ntBASIC6.16□□□□□ -1.42
MRE11P49959 RPL31P3-201ENST00000458430 332 ntBASIC6.16□□□□□ -1.42
MRE11P49959 RPS3AP43-201ENST00000479743 781 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms