Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC025918.2-201ENST00000558683 763 ntBASIC4.84□□□□□ -1.63
LHX1P48742 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.84□□□□□ -1.63
LHX1P48742 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
LHX1P48742 RN7SL435P-201ENST00000584418 282 ntBASIC4.84□□□□□ -1.63
LHX1P48742 HMGB2P1-201ENST00000591146 634 ntBASIC4.84□□□□□ -1.63
LHX1P48742 RPL26P30-202ENST00000602923 645 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AL356218.2-201ENST00000605264 187 ntBASIC4.84□□□□□ -1.63
LHX1P48742 COX6CP4-201ENST00000605798 228 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AC025175.1-201ENST00000606482 759 ntBASIC4.84□□□□□ -1.63
LHX1P48742 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LHX1P48742 AC006840.1-201ENST00000623069 542 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AC097460.3-201ENST00000623099 442 ntBASIC4.84□□□□□ -1.63
LHX1P48742 FRG1DP-201ENST00000635586 771 ntBASIC4.84□□□□□ -1.63
LHX1P48742 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
LHX1P48742 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LHX1P48742 PCAT14-202ENST00000627127 3935 ntBASIC4.84□□□□□ -1.64
LHX1P48742 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LHX1P48742 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LHX1P48742 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 HSPA8P17-201ENST00000427029 1382 ntBASIC4.83□□□□□ -1.64
LHX1P48742 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
LHX1P48742 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LHX1P48742 RNA5SP447-201ENST00000363749 119 ntBASIC4.83□□□□□ -1.64
LHX1P48742 MIR659-201ENST00000384963 97 ntBASIC4.83□□□□□ -1.64
LHX1P48742 MIR141-201ENST00000384975 95 ntBASIC4.83□□□□□ -1.64
LHX1P48742 RNU6-244P-201ENST00000391028 104 ntBASIC4.83□□□□□ -1.64
LHX1P48742 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
LHX1P48742 RPL7AP25-201ENST00000423357 805 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 BX119904.1-201ENST00000432026 348 ntBASIC4.83□□□□□ -1.64
LHX1P48742 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.83□□□□□ -1.64
LHX1P48742 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.83□□□□□ -1.64
LHX1P48742 MTCYBP21-201ENST00000443300 1113 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AL031584.1-201ENST00000447169 754 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AC078857.1-201ENST00000469870 667 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 NPM1P29-201ENST00000483112 803 ntBASIC4.83□□□□□ -1.64
LHX1P48742 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.83□□□□□ -1.64
LHX1P48742 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LHX1P48742 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.83□□□□□ -1.64
LHX1P48742 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 AC034205.1-201ENST00000520621 638 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AC009643.1-201ENST00000532030 391 ntBASIC4.83□□□□□ -1.64
LHX1P48742 NPM1P35-201ENST00000533043 868 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 AC005776.1-201ENST00000603164 290 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AC023762.1-201ENST00000603280 584 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AL049844.2-201ENST00000604280 628 ntBASIC4.83□□□□□ -1.64
LHX1P48742 AC005014.3-201ENST00000605985 190 ntBASIC4.83□□□□□ -1.64
LHX1P48742 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.83□□□□□ -1.64
LHX1P48742 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.83□□□□□ -1.64
LHX1P48742 AC012409.3-201ENST00000611343 981 ntBASIC4.83□□□□□ -1.64
LHX1P48742 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LHX1P48742 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 CPHL1P-201ENST00000461341 3407 ntBASIC4.83□□□□□ -1.64
LHX1P48742 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 AC139713.2-214ENST00000642059 1811 ntBASIC4.83□□□□□ -1.64
LHX1P48742 STX3-208ENST00000641815 3236 ntBASIC4.83□□□□□ -1.64
LHX1P48742 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
LHX1P48742 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LHX1P48742 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LHX1P48742 LINC00622-201ENST00000562811 1570 ntBASIC4.82□□□□□ -1.64
LHX1P48742 AC097461.1-201ENST00000568928 2821 ntBASIC4.82□□□□□ -1.64
LHX1P48742 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
LHX1P48742 CASC19-284ENST00000642142 1868 ntBASIC4.82□□□□□ -1.64
LHX1P48742 RNU6-666P-201ENST00000363499 107 ntBASIC4.82□□□□□ -1.64
LHX1P48742 RNU6-609P-201ENST00000365459 107 ntBASIC4.82□□□□□ -1.64
LHX1P48742 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LHX1P48742 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LHX1P48742 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LHX1P48742 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.82□□□□□ -1.64
LHX1P48742 RNU4-74P-201ENST00000411280 161 ntBASIC4.82□□□□□ -1.64
LHX1P48742 TATDN1P1-201ENST00000414123 891 ntBASIC4.82□□□□□ -1.64
LHX1P48742 RAD23BP1-201ENST00000421404 1227 ntBASIC4.82□□□□□ -1.64
LHX1P48742 RPL36AP10-201ENST00000421785 322 ntBASIC4.82□□□□□ -1.64
LHX1P48742 AP001324.1-201ENST00000428553 399 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms