Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.02□□□□□ -1.61
HADHAP40939 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.02□□□□□ -1.61
HADHAP40939 AC126365.2-201ENST00000580630 379 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC133794.1-201ENST00000602731 914 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC105254.2-201ENST00000603636 436 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AL445222.1-201ENST00000607259 628 ntBASIC5.02□□□□□ -1.61
HADHAP40939 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.02□□□□□ -1.61
HADHAP40939 AC123768.4-201ENST00000616244 701 ntBASIC5.02□□□□□ -1.61
HADHAP40939 AC138907.10-201ENST00000623708 983 ntBASIC5.02□□□□□ -1.61
HADHAP40939 LINC01739-205ENST00000641890 573 ntBASIC5.02□□□□□ -1.61
HADHAP40939 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.02□□□□□ -1.61
HADHAP40939 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.02□□□□□ -1.61
HADHAP40939 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HADHAP40939 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HADHAP40939 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 AC092162.3-201ENST00000624511 1624 ntBASIC5.01□□□□□ -1.61
HADHAP40939 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 AP001273.1-201ENST00000624493 3152 ntBASIC5.01□□□□□ -1.61
HADHAP40939 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 AL133268.1-201ENST00000405676 1401 ntBASIC5.01□□□□□ -1.61
HADHAP40939 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 ENSAP3-201ENST00000312710 333 ntBASIC5.01□□□□□ -1.61
HADHAP40939 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 OR52E6-202ENST00000379946 954 ntBASIC5.01□□□□□ -1.61
HADHAP40939 RNU6-1257P-201ENST00000384625 110 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL035419.1-201ENST00000397037 564 ntBASIC5.01□□□□□ -1.61
HADHAP40939 LRRC37BP1-201ENST00000398851 714 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL589647.1-201ENST00000402485 466 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL355615.1-201ENST00000406187 641 ntBASIC5.01□□□□□ -1.61
HADHAP40939 HMGB3P18-201ENST00000406327 590 ntBASIC5.01□□□□□ -1.61
HADHAP40939 MIR1271-201ENST00000408537 86 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC092745.2-202ENST00000411880 369 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL445183.3-201ENST00000414168 502 ntBASIC5.01□□□□□ -1.61
HADHAP40939 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 RPL36AP10-201ENST00000421785 322 ntBASIC5.01□□□□□ -1.61
HADHAP40939 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 MRPL50P1-201ENST00000431951 384 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 AC044797.1-201ENST00000445744 679 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 IGHV5-78-201ENST00000450948 295 ntBASIC5.01□□□□□ -1.61
HADHAP40939 IFNWP4-201ENST00000453148 294 ntBASIC5.01□□□□□ -1.61
HADHAP40939 GTF2IP12-201ENST00000456547 356 ntBASIC5.01□□□□□ -1.61
HADHAP40939 MTND2P39-201ENST00000457230 764 ntBASIC5.01□□□□□ -1.61
HADHAP40939 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 MTND6P6-201ENST00000478031 263 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC090114.3-201ENST00000479267 829 ntBASIC5.01□□□□□ -1.61
HADHAP40939 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 AC112198.4-201ENST00000515450 351 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 AC010476.1-201ENST00000519111 851 ntBASIC5.01□□□□□ -1.61
HADHAP40939 IGKV2-36-201ENST00000519999 223 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 AC083923.1-201ENST00000523708 376 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC012339.2-201ENST00000523996 453 ntBASIC5.01□□□□□ -1.61
HADHAP40939 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HADHAP40939 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.01□□□□□ -1.61
HADHAP40939 MIR3691-201ENST00000578066 90 ntBASIC5.01□□□□□ -1.61
HADHAP40939 MIR4716-201ENST00000579628 84 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 BNIP3P27-201ENST00000599991 412 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 AC004948.1-201ENST00000609858 672 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC096586.1-201ENST00000610267 561 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC100847.1-201ENST00000611316 481 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 AC009318.3-201ENST00000616916 503 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 AP003476.1-201ENST00000623984 516 ntBASIC5.01□□□□□ -1.61
HADHAP40939 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.01□□□□□ -1.61
HADHAP40939 CDRT1-208ENST00000630868 794 ntBASIC5.01□□□□□ -1.61
HADHAP40939 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 U6.107-201ENST00000637108 79 ntBASIC5.01□□□□□ -1.61
HADHAP40939 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.01□□□□□ -1.61
HADHAP40939 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.01□□□□□ -1.61
HADHAP40939 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HADHAP40939 AC131971.1-201ENST00000332881 1482 ntBASIC5□□□□□ -1.61
HADHAP40939 ACTR3BP5-201ENST00000448440 1479 ntBASIC5□□□□□ -1.61
HADHAP40939 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HADHAP40939 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HADHAP40939 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5□□□□□ -1.61
HADHAP40939 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HADHAP40939 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms