Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 AP001207.1-201ENST00000524051 481 ntBASIC5.4□□□□□ -1.54
MSX2P35548 OR4R3P-201ENST00000525084 838 ntBASIC5.4□□□□□ -1.54
MSX2P35548 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.4□□□□□ -1.54
MSX2P35548 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MSX2P35548 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.4□□□□□ -1.54
MSX2P35548 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.4□□□□□ -1.54
MSX2P35548 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.4□□□□□ -1.54
MSX2P35548 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.4□□□□□ -1.54
MSX2P35548 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 MRPS21P8-201ENST00000569196 235 ntBASIC5.4□□□□□ -1.54
MSX2P35548 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
MSX2P35548 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.4□□□□□ -1.54
MSX2P35548 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.4□□□□□ -1.54
MSX2P35548 MIR7844-201ENST00000616161 122 ntBASIC5.4□□□□□ -1.54
MSX2P35548 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
MSX2P35548 AC089999.3-201ENST00000622440 577 ntBASIC5.4□□□□□ -1.54
MSX2P35548 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.4□□□□□ -1.54
MSX2P35548 CASC19-264ENST00000641912 1184 ntBASIC5.4□□□□□ -1.54
MSX2P35548 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
MSX2P35548 ZNF733P-202ENST00000444809 1573 ntBASIC5.4□□□□□ -1.55
MSX2P35548 AC019072.1-201ENST00000604535 1551 ntBASIC5.4□□□□□ -1.55
MSX2P35548 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
MSX2P35548 GNL2P1-201ENST00000451274 2190 ntBASIC5.4□□□□□ -1.55
MSX2P35548 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 AC144833.1-201ENST00000567953 4089 ntBASIC5.4□□□□□ -1.55
MSX2P35548 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
MSX2P35548 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MSX2P35548 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 ADAM5-202ENST00000399789 1942 ntBASIC5.39□□□□□ -1.55
MSX2P35548 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 Y_RNA.390-201ENST00000383932 102 ntBASIC5.39□□□□□ -1.55
MSX2P35548 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MSX2P35548 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 TCEA1P4-201ENST00000415066 844 ntBASIC5.39□□□□□ -1.55
MSX2P35548 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 AC108479.1-201ENST00000431142 427 ntBASIC5.39□□□□□ -1.55
MSX2P35548 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 UBE2V1P8-201ENST00000437166 265 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AC093155.1-201ENST00000440164 826 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MSX2P35548 CNOT7P2-201ENST00000441051 832 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AL031681.1-201ENST00000443304 400 ntBASIC5.39□□□□□ -1.55
MSX2P35548 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 HMGB1P16-201ENST00000447155 540 ntBASIC5.39□□□□□ -1.55
MSX2P35548 SNORD125-201ENST00000459538 96 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 RPL5P24-201ENST00000463742 885 ntBASIC5.39□□□□□ -1.55
MSX2P35548 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 MYL12BP2-201ENST00000503948 512 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 MAST4-IT1-201ENST00000514241 658 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 IGLV3-30-201ENST00000524362 298 ntBASIC5.39□□□□□ -1.55
MSX2P35548 NPIPB14P-203ENST00000532298 987 ntBASIC5.39□□□□□ -1.55
MSX2P35548 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 AC074029.1-201ENST00000552531 1044 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.39□□□□□ -1.55
MSX2P35548 TPRKBP2-201ENST00000565969 475 ntBASIC5.39□□□□□ -1.55
MSX2P35548 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 AC068276.1-201ENST00000605793 379 ntBASIC5.39□□□□□ -1.55
MSX2P35548 AL080312.2-201ENST00000613001 630 ntBASIC5.39□□□□□ -1.55
MSX2P35548 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
MSX2P35548 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
MSX2P35548 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 AC074140.1-201ENST00000621617 208 ntBASIC5.39□□□□□ -1.55
MSX2P35548 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSX2P35548 AC099063.3-201ENST00000642066 185 ntBASIC5.39□□□□□ -1.55
MSX2P35548 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
MSX2P35548 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms