Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCN4AP35499 AC097461.1-201ENST00000568928 2821 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 USP9YP4-201ENST00000424401 1745 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SCN4AP35499 RPL36AP10-201ENST00000421785 322 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 AP000907.1-201ENST00000428428 510 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 AC007967.1-201ENST00000455422 1159 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4AP35499 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN4AP35499 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN4AP35499 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4AP35499 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN4AP35499 AC107016.1-201ENST00000550463 337 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 AC016839.1-201ENST00000578162 867 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 AP005262.1-201ENST00000582646 997 ntBASIC5.07□□□□□ -1.6
SCN4AP35499 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN4AP35499 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SCN4AP35499 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4AP35499 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4AP35499 RNU1-20P-201ENST00000363314 162 ntBASIC5.06□□□□□ -1.6
SCN4AP35499 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4AP35499 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
SCN4AP35499 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4AP35499 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4AP35499 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4AP35499 DDX39BP2-208ENST00000453923 258 ntBASIC5.06□□□□□ -1.6
SCN4AP35499 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4AP35499 RPL38P1-201ENST00000460914 211 ntBASIC5.06□□□□□ -1.6
SCN4AP35499 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4AP35499 AC037471.2-201ENST00000564941 598 ntBASIC5.06□□□□□ -1.6
SCN4AP35499 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4AP35499 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 AC024560.2-201ENST00000507981 1497 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN4AP35499 RNA5SP175-201ENST00000364275 119 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 SNORA57.3-201ENST00000411095 141 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN4AP35499 AL139099.1-201ENST00000497398 403 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 ARL4AP1-201ENST00000503220 705 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4AP35499 SNORA70.24-201ENST00000517233 118 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4AP35499 MIR4433B-201ENST00000581329 102 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 AC233702.9-201ENST00000581528 203 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.05□□□□□ -1.6
SCN4AP35499 AL606490.9-201ENST00000603331 271 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 MIR8069-1-201ENST00000616627 86 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4AP35499 MIR8069-2-201ENST00000621412 86 ntBASIC5.05□□□□□ -1.6
SCN4AP35499 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4AP35499 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4AP35499 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4AP35499 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 MIR183-201ENST00000384958 110 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 MIR218-2-201ENST00000385006 110 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 Z92545.1-201ENST00000411782 234 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AC096664.2-201ENST00000411843 406 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 OR5BE1P-201ENST00000425977 939 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4AP35499 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4AP35499 AC004938.1-201ENST00000438468 308 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AC074250.1-201ENST00000511117 192 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 AC087477.6-201ENST00000559595 843 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.04□□□□□ -1.6
SCN4AP35499 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4AP35499 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.04□□□□□ -1.6
SCN4AP35499 OR5BE1P-202ENST00000641168 1176 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 AL121839.2-201ENST00000565058 6943 ntBASIC5.04□□□□□ -1.6
SCN4AP35499 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SCN4AP35499 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SCN4AP35499 AL049781.1-201ENST00000623195 3585 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms