Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
XPAP23025 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
XPAP23025 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
XPAP23025 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 AC007996.1-201ENST00000620414 2821 ntBASIC5.63□□□□□ -1.51
XPAP23025 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.63□□□□□ -1.51
XPAP23025 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 RNU6-192P-201ENST00000391253 100 ntBASIC5.63□□□□□ -1.51
XPAP23025 AL355379.1-201ENST00000405542 640 ntBASIC5.63□□□□□ -1.51
XPAP23025 METTL15P3-201ENST00000415522 1221 ntBASIC5.63□□□□□ -1.51
XPAP23025 NPM1P11-201ENST00000417106 855 ntBASIC5.63□□□□□ -1.51
XPAP23025 IFNNP1-201ENST00000429219 553 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC244035.1-201ENST00000430042 390 ntBASIC5.63□□□□□ -1.51
XPAP23025 MTCO1P54-201ENST00000430139 712 ntBASIC5.63□□□□□ -1.51
XPAP23025 USP9YP31-201ENST00000431405 881 ntBASIC5.63□□□□□ -1.51
XPAP23025 AL353706.1-201ENST00000436728 494 ntBASIC5.63□□□□□ -1.51
XPAP23025 MTND4P6-201ENST00000438297 472 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC093155.1-201ENST00000440164 826 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.63□□□□□ -1.51
XPAP23025 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 VDAC2P4-201ENST00000452925 711 ntBASIC5.63□□□□□ -1.51
XPAP23025 RPL10P17-201ENST00000453852 316 ntBASIC5.63□□□□□ -1.51
XPAP23025 RFC5P1-201ENST00000454419 874 ntBASIC5.63□□□□□ -1.51
XPAP23025 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.63□□□□□ -1.51
XPAP23025 NCOR1P1-202ENST00000486162 291 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC068724.1-201ENST00000487100 792 ntBASIC5.63□□□□□ -1.51
XPAP23025 PDCL3P4-201ENST00000489621 720 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.63□□□□□ -1.51
XPAP23025 AC147055.4-201ENST00000504399 745 ntBASIC5.63□□□□□ -1.51
XPAP23025 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.63□□□□□ -1.51
XPAP23025 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.63□□□□□ -1.51
XPAP23025 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.63□□□□□ -1.51
XPAP23025 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.63□□□□□ -1.51
XPAP23025 AL121766.1-201ENST00000547436 487 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC007225.2-201ENST00000562529 256 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.63□□□□□ -1.51
XPAP23025 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.63□□□□□ -1.51
XPAP23025 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.63□□□□□ -1.51
XPAP23025 H3F3BP2-201ENST00000583907 357 ntBASIC5.63□□□□□ -1.51
XPAP23025 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
XPAP23025 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.63□□□□□ -1.51
XPAP23025 VN1R88P-201ENST00000596787 292 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.63□□□□□ -1.51
XPAP23025 AC097505.1-201ENST00000610199 565 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC079395.2-201ENST00000610982 737 ntBASIC5.63□□□□□ -1.51
XPAP23025 AC008083.4-201ENST00000615076 444 ntBASIC5.63□□□□□ -1.51
XPAP23025 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.63□□□□□ -1.51
XPAP23025 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.63□□□□□ -1.51
XPAP23025 AC109315.1-201ENST00000584143 1347 ntBASIC5.63□□□□□ -1.51
XPAP23025 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.63□□□□□ -1.51
XPAP23025 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
XPAP23025 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
XPAP23025 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
XPAP23025 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
XPAP23025 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.63□□□□□ -1.51
XPAP23025 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.62□□□□□ -1.51
XPAP23025 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
XPAP23025 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
XPAP23025 AC015799.1-201ENST00000622996 3122 ntBASIC5.62□□□□□ -1.51
XPAP23025 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
XPAP23025 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 IGKV7-3-201ENST00000357453 298 ntBASIC5.62□□□□□ -1.51
XPAP23025 RN7SKP6-201ENST00000364795 319 ntBASIC5.62□□□□□ -1.51
XPAP23025 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 RNU1-136P-201ENST00000384181 164 ntBASIC5.62□□□□□ -1.51
XPAP23025 FABP12P1-201ENST00000401911 322 ntBASIC5.62□□□□□ -1.51
XPAP23025 AL031577.2-201ENST00000404133 280 ntBASIC5.62□□□□□ -1.51
XPAP23025 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 Y_RNA.619-201ENST00000410951 90 ntBASIC5.62□□□□□ -1.51
XPAP23025 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.62□□□□□ -1.51
XPAP23025 RNF10P1-201ENST00000418589 369 ntBASIC5.62□□□□□ -1.51
XPAP23025 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.62□□□□□ -1.51
XPAP23025 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.62□□□□□ -1.51
XPAP23025 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.62□□□□□ -1.51
XPAP23025 AC242426.1-201ENST00000435270 960 ntBASIC5.62□□□□□ -1.51
XPAP23025 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.62□□□□□ -1.51
XPAP23025 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.62□□□□□ -1.51
XPAP23025 NPM1P33-201ENST00000438918 872 ntBASIC5.62□□□□□ -1.51
XPAP23025 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.62□□□□□ -1.51
XPAP23025 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.62□□□□□ -1.51
XPAP23025 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.62□□□□□ -1.51
XPAP23025 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
XPAP23025 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.62□□□□□ -1.51
XPAP23025 AL450023.1-201ENST00000450868 751 ntBASIC5.62□□□□□ -1.51
XPAP23025 RNU7-27P-201ENST00000459281 62 ntBASIC5.62□□□□□ -1.51
XPAP23025 AC100832.1-201ENST00000471945 383 ntBASIC5.62□□□□□ -1.51
XPAP23025 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms