Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 RN7SKP162-201ENST00000363605 345 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 RNU6-1215P-201ENST00000384441 102 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 U3.23-201ENST00000391132 200 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 RNU2-16P-201ENST00000410712 136 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 PGBD4P8-201ENST00000412993 562 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 AC019050.1-201ENST00000418508 492 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 MED14P1-201ENST00000430517 648 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.87□□□□□ -1.47
PTPN1P18031 MTND1P1-201ENST00000445453 368 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 RPL31P44-201ENST00000447680 377 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 RPS17P5-201ENST00000498293 408 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 AC010460.1-201ENST00000507087 466 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.87□□□□□ -1.47
PTPN1P18031 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN1P18031 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN1P18031 AC136777.2-201ENST00000522979 358 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.87□□□□□ -1.47
PTPN1P18031 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTPN1P18031 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN1P18031 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN1P18031 AL136363.2-201ENST00000604173 851 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 SUGT1P3-202ENST00000604259 383 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 AC239868.4-201ENST00000608318 671 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 AL136981.2-201ENST00000617319 734 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 AC069209.1-201ENST00000619282 651 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 AC127502.3-201ENST00000636170 1206 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.87□□□□□ -1.47
PTPN1P18031 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN1P18031 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PTPN1P18031 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN1P18031 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN1P18031 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PTPN1P18031 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTPN1P18031 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 HMGB1P5-201ENST00000255320 642 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 Y_RNA.3-201ENST00000362331 103 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 U3.4-201ENST00000363352 213 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN1P18031 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PTPN1P18031 SNORA11C-201ENST00000408532 129 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 RN7SKP142-201ENST00000411236 328 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 RPSAP35-201ENST00000413753 818 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.86□□□□□ -1.47
PTPN1P18031 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 SPRYD7P1-201ENST00000443861 570 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 DYNLL1P6-201ENST00000503440 264 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 RNU6-416P-201ENST00000516265 103 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 AC087808.1-201ENST00000520501 361 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC008083.2-201ENST00000546707 476 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC007225.2-201ENST00000562529 256 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN1P18031 ROCK1P1-201ENST00000573767 549 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 MIR4489-201ENST00000578869 62 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 OR4K7P-201ENST00000580232 945 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN1P18031 AC079089.3-201ENST00000603094 673 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 AC128687.1-201ENST00000605304 619 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 AC092794.1-201ENST00000612734 582 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 AC005840.5-201ENST00000619166 599 ntBASIC5.86□□□□□ -1.47
PTPN1P18031 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.86□□□□□ -1.47
PTPN1P18031 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PTPN1P18031 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN1P18031 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms