Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL5A2P05997 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.46□□□□□ -1.54
COL5A2P05997 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A2P05997 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
COL5A2P05997 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL5A2P05997 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 SNORD66.1-201ENST00000391230 76 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 AL450992.3-201ENST00000413192 568 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 RPS26P4-201ENST00000431743 355 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A2P05997 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
COL5A2P05997 AC108145.1-201ENST00000503770 153 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 KRT19P6-201ENST00000510983 209 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A2P05997 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A2P05997 YPEL5P3-201ENST00000547227 352 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A2P05997 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 AL391261.4-201ENST00000616012 481 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A2P05997 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.45□□□□□ -1.54
COL5A2P05997 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A2P05997 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A2P05997 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A2P05997 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.45□□□□□ -1.54
COL5A2P05997 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A2P05997 AL929601.4-201ENST00000613011 1341 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 RNA5SP187-201ENST00000384400 119 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 AL078604.1-201ENST00000404609 466 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 RPS3AP12-201ENST00000443616 753 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 RPL36AP13-201ENST00000457490 317 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.45□□□□□ -1.54
COL5A2P05997 SCARNA13-201ENST00000516672 275 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 IGKV2D-19-201ENST00000523346 262 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL5A2P05997 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A2P05997 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.45□□□□□ -1.54
COL5A2P05997 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.45□□□□□ -1.54
COL5A2P05997 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.45□□□□□ -1.54
COL5A2P05997 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL5A2P05997 AL672167.1-204ENST00000641875 3017 ntBASIC5.44□□□□□ -1.54
COL5A2P05997 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL5A2P05997 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COL5A2P05997 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.44□□□□□ -1.54
COL5A2P05997 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.44□□□□□ -1.54
COL5A2P05997 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
COL5A2P05997 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.44□□□□□ -1.54
COL5A2P05997 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.44□□□□□ -1.54
COL5A2P05997 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.44□□□□□ -1.54
COL5A2P05997 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL5A2P05997 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.44□□□□□ -1.54
COL5A2P05997 AC090312.1-201ENST00000580637 348 ntBASIC5.44□□□□□ -1.54
COL5A2P05997 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.44□□□□□ -1.54
COL5A2P05997 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.44□□□□□ -1.54
COL5A2P05997 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL5A2P05997 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL5A2P05997 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL5A2P05997 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL5A2P05997 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.43□□□□□ -1.54
COL5A2P05997 AC105074.1-201ENST00000623380 3095 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL5A2P05997 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL5A2P05997 SYF2P2-201ENST00000417620 583 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.43□□□□□ -1.54
COL5A2P05997 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 snoU13.24-201ENST00000458998 104 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 AC090013.1-201ENST00000485147 480 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL5A2P05997 RNU1-95P-201ENST00000516357 160 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 RNU1-128P-201ENST00000516704 160 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 DUXAP2-201ENST00000519198 589 ntBASIC5.43□□□□□ -1.54
COL5A2P05997 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.43□□□□□ -1.54
COL5A2P05997 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.43□□□□□ -1.54
COL5A2P05997 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.43□□□□□ -1.54
COL5A2P05997 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.43□□□□□ -1.54
COL5A2P05997 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.43□□□□□ -1.54
COL5A2P05997 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL5A2P05997 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL5A2P05997 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL5A2P05997 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL5A2P05997 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL5A2P05997 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL5A2P05997 ERCC6-202ENST00000374127 1782 ntBASIC5.42□□□□□ -1.54
COL5A2P05997 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms