Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR383-201ENST00000362257 73 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 ST13P16-201ENST00000401760 781 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 SNORA79B-201ENST00000410557 148 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 RN7SKP33-201ENST00000410942 340 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 OR8G2P-201ENST00000412796 908 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC011742.1-201ENST00000431448 434 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL353748.1-201ENST00000440753 474 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 RPL36AP13-201ENST00000457490 317 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 UQCRHP4-201ENST00000471686 272 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC105137.1-201ENST00000484355 562 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 RPS27AP13-201ENST00000498403 237 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AP003730.1-201ENST00000524605 285 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC018552.1-201ENST00000562099 811 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AL023881.1-201ENST00000621088 301 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTDNEP1O95476 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTDNEP1O95476 AC097504.1-201ENST00000515103 2415 ntBASIC4.76□□□□□ -1.65
CTDNEP1O95476 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTDNEP1O95476 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.76□□□□□ -1.65
CTDNEP1O95476 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 NAMPTP1-201ENST00000440465 2514 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 RNA5SP513-201ENST00000364648 118 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 RNA5SP39-201ENST00000411245 120 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 AL807761.1-201ENST00000417622 171 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 RNU7-157P-201ENST00000459600 66 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC093840.1-201ENST00000511599 336 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC125612.1-201ENST00000547580 377 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC012417.1-201ENST00000582307 1039 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 KPNA2P3-201ENST00000584190 848 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 MIR5684-201ENST00000585074 65 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AL445423.1-201ENST00000609941 536 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 MIR8059-201ENST00000620427 81 ntBASIC4.75□□□□□ -1.65
CTDNEP1O95476 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTDNEP1O95476 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CTDNEP1O95476 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 RNU11-4P-201ENST00000391149 133 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 SNORA3C-201ENST00000408792 125 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 RPL23AP46-201ENST00000438548 490 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 ARAFP2-201ENST00000440565 559 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 AL591623.2-201ENST00000449978 222 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC002553.2-201ENST00000453217 340 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms