Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBE4BO95155 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBE4BO95155 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBE4BO95155 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBE4BO95155 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
UBE4BO95155 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 RNA5SP505-201ENST00000364748 108 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 RNU6-152P-201ENST00000384037 107 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC092570.3-201ENST00000420113 693 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE4BO95155 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC007563.3-201ENST00000433233 371 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC092447.2-201ENST00000435487 669 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE4BO95155 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC007537.2-201ENST00000472093 511 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE4BO95155 HMGB1P47-201ENST00000511281 589 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 RNU6-491P-201ENST00000516099 110 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE4BO95155 OR5AN2P-201ENST00000534535 896 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
UBE4BO95155 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC084783.1-201ENST00000565846 910 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 AC073111.2-201ENST00000605657 1075 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AL023583.1-201ENST00000607518 1143 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC245389.2-201ENST00000616023 576 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC242843.1-201ENST00000618702 573 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 MIR7641-1-201ENST00000627518 61 ntBASIC4.89□□□□□ -1.63
UBE4BO95155 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
UBE4BO95155 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE4BO95155 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.88□□□□□ -1.63
UBE4BO95155 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
UBE4BO95155 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 IL6STP1-201ENST00000346911 1020 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AMZ2P2-201ENST00000406819 1057 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 RPL7AP25-201ENST00000423357 805 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 ARL2BPP10-201ENST00000446487 531 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AL627224.1-201ENST00000448334 444 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE4BO95155 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE4BO95155 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 RPS27AP17-201ENST00000463344 455 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 RPL23AP72-201ENST00000492447 435 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.88□□□□□ -1.63
UBE4BO95155 AC021087.2-201ENST00000504656 1203 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AC021146.3-201ENST00000511911 260 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AC015795.1-201ENST00000513669 327 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AC034244.2-201ENST00000514668 858 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.88□□□□□ -1.63
UBE4BO95155 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.88□□□□□ -1.63
UBE4BO95155 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE4BO95155 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE4BO95155 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE4BO95155 AC096553.1-201ENST00000605169 829 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 Z98200.1-201ENST00000607298 470 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AC012409.3-201ENST00000611343 981 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE4BO95155 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE4BO95155 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.88□□□□□ -1.63
UBE4BO95155 AL596275.2-204ENST00000641628 552 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 AL596275.2-206ENST00000641957 626 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE4BO95155 RAD17P1-201ENST00000418130 2042 ntBASIC4.88□□□□□ -1.63
UBE4BO95155 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
UBE4BO95155 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE4BO95155 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE4BO95155 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE4BO95155 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
UBE4BO95155 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.87□□□□□ -1.63
UBE4BO95155 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
UBE4BO95155 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE4BO95155 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE4BO95155 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.87□□□□□ -1.63
UBE4BO95155 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE4BO95155 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE4BO95155 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE4BO95155 RNU4-44P-201ENST00000363050 141 ntBASIC4.87□□□□□ -1.63
UBE4BO95155 MIR421-201ENST00000365696 85 ntBASIC4.87□□□□□ -1.63
UBE4BO95155 MIR3065-201ENST00000390137 79 ntBASIC4.87□□□□□ -1.63
UBE4BO95155 NCSTNP1-201ENST00000406229 144 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms