Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AL772161.1-201ENST00000439130 476 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC114495.1-201ENST00000441274 436 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AC011753.3-201ENST00000443436 406 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 RPL7P33-201ENST00000444159 742 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.25□□□□□ -1.73
SEMA3DO95025 MTND6P32-201ENST00000457611 483 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 RPS26P28-201ENST00000470806 348 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SEMA3DO95025 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SEMA3DO95025 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.25□□□□□ -1.73
SEMA3DO95025 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEMA3DO95025 AC093311.1-201ENST00000506586 2021 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC113398.2-201ENST00000507630 558 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 RNA5SP154-201ENST00000516193 111 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 IGLV3-26-201ENST00000520756 302 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEMA3DO95025 AC100770.1-201ENST00000532310 322 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.25□□□□□ -1.73
SEMA3DO95025 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AC008638.3-201ENST00000603341 463 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC008782.1-201ENST00000603386 430 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC100847.1-201ENST00000611316 481 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AC078899.5-201ENST00000612475 178 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 MIR6891-201ENST00000618788 93 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AL049536.1-201ENST00000625043 744 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.25□□□□□ -1.73
SEMA3DO95025 AC015813.6-201ENST00000624409 5808 ntBASIC4.25□□□□□ -1.73
SEMA3DO95025 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEMA3DO95025 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.25□□□□□ -1.73
SEMA3DO95025 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
SEMA3DO95025 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
SEMA3DO95025 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SEMA3DO95025 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.24□□□□□ -1.73
SEMA3DO95025 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 AC092079.1-201ENST00000558620 1985 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 RNU6-1331P-201ENST00000363658 106 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 RN7SKP103-201ENST00000363848 320 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 RHOT1P2-201ENST00000366423 333 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SEMA3DO95025 RNA5SP39-201ENST00000411245 120 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AL590139.1-201ENST00000416267 400 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 ARAFP1-201ENST00000422172 605 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.24□□□□□ -1.73
SEMA3DO95025 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.24□□□□□ -1.73
SEMA3DO95025 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.24□□□□□ -1.73
SEMA3DO95025 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 AL121834.1-201ENST00000572284 509 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 MTND2P13-201ENST00000577438 1039 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.24□□□□□ -1.73
SEMA3DO95025 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.24□□□□□ -1.73
SEMA3DO95025 AC115286.1-201ENST00000604298 434 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AC116447.1-201ENST00000613153 453 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AC023509.5-201ENST00000617434 807 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AP005019.3-201ENST00000620418 560 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.24□□□□□ -1.73
SEMA3DO95025 OR2L1P-202ENST00000641567 1023 ntBASIC4.24□□□□□ -1.73
SEMA3DO95025 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.24□□□□□ -1.73
SEMA3DO95025 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SEMA3DO95025 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SEMA3DO95025 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 MAPK10-253ENST00000641010 4072 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.23□□□□□ -1.73
SEMA3DO95025 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SEMA3DO95025 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SEMA3DO95025 AC079741.1-201ENST00000321498 212 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 RNU6-146P-201ENST00000384602 108 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SEMA3DO95025 RPS3AP23-201ENST00000401762 784 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 AL136131.1-201ENST00000406079 803 ntBASIC4.23□□□□□ -1.73
SEMA3DO95025 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms