Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.39□□□□□ -1.71
LMX1BO60663 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.39□□□□□ -1.71
LMX1BO60663 AL691482.1-201ENST00000453255 87 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 Z95152.1-201ENST00000453556 656 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC008280.2-201ENST00000455473 307 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.39□□□□□ -1.71
LMX1BO60663 TPTE2P5-203ENST00000458118 728 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 RN7SL443P-201ENST00000464331 290 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 FTH1P2-201ENST00000466086 412 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC092324.1-201ENST00000468671 324 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 RN7SL738P-201ENST00000470264 297 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC093267.1-201ENST00000489176 961 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 RPS27AP16-201ENST00000492222 470 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC023424.1-201ENST00000496058 459 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.39□□□□□ -1.71
LMX1BO60663 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.39□□□□□ -1.71
LMX1BO60663 OR7E128P-201ENST00000532736 1024 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AL121839.1-201ENST00000556233 1185 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.39□□□□□ -1.71
LMX1BO60663 NDUFB4P11-201ENST00000560510 395 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC093591.2-201ENST00000565254 3843 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC005951.1-201ENST00000576706 485 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.39□□□□□ -1.71
LMX1BO60663 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.39□□□□□ -1.71
LMX1BO60663 AC021171.1-201ENST00000603137 706 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC079610.2-201ENST00000604818 690 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC012557.1-201ENST00000607115 611 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC093799.2-201ENST00000610062 578 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 PART1_2.1-201ENST00000612397 250 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC015914.2-201ENST00000618167 288 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AL731566.2-201ENST00000618971 317 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 AC017037.3-201ENST00000625016 472 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.39□□□□□ -1.71
LMX1BO60663 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.39□□□□□ -1.71
LMX1BO60663 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.39□□□□□ -1.71
LMX1BO60663 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 PCAT14-202ENST00000627127 3935 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.39□□□□□ -1.71
LMX1BO60663 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LMX1BO60663 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LMX1BO60663 MAPK10-263ENST00000641052 4307 ntBASIC4.39□□□□□ -1.71
LMX1BO60663 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.39□□□□□ -1.71
LMX1BO60663 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LMX1BO60663 OR5H2-201ENST00000355273 945 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LMX1BO60663 CYB5AP4-201ENST00000396692 399 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 RPL10P10-201ENST00000403509 664 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 RNU2-17P-201ENST00000410290 190 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 RAB28P1-201ENST00000411517 641 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 UBE2V1P11-201ENST00000411559 285 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 LUZP4P1-201ENST00000415420 344 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 AC009518.2-201ENST00000418056 731 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 GNG5P5-201ENST00000420444 220 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LMX1BO60663 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 MTND4P32-201ENST00000437189 1237 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 TXNP5-201ENST00000441043 315 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 GTF3AP5-201ENST00000442645 697 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 RPL6P5-201ENST00000445678 828 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.38□□□□□ -1.71
LMX1BO60663 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 MTCO2P15-201ENST00000532655 656 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 AL109741.3-201ENST00000561748 592 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LMX1BO60663 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.38□□□□□ -1.71
LMX1BO60663 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.38□□□□□ -1.71
LMX1BO60663 AC015726.1-201ENST00000602353 681 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 AL353778.1-201ENST00000603149 408 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 AC006363.1-201ENST00000603806 463 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 AC087783.2-201ENST00000605070 562 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.38□□□□□ -1.71
LMX1BO60663 AC091304.6-201ENST00000619761 202 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms