Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 IMMP1LP1-201ENST00000605170 488 ntBASIC5.8□□□□□ -1.48
CHD2O14647 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD2O14647 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHD2O14647 MIR3651-201ENST00000630427 90 ntBASIC5.8□□□□□ -1.48
CHD2O14647 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.8□□□□□ -1.48
CHD2O14647 LINC00561-201ENST00000565815 2738 ntBASIC5.8□□□□□ -1.48
CHD2O14647 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CHD2O14647 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CHD2O14647 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD2O14647 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CHD2O14647 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD2O14647 RPL36AP10-201ENST00000421785 322 ntBASIC5.79□□□□□ -1.48
CHD2O14647 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.79□□□□□ -1.48
CHD2O14647 AL353748.1-201ENST00000440753 474 ntBASIC5.79□□□□□ -1.48
CHD2O14647 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.79□□□□□ -1.48
CHD2O14647 AC006064.5-201ENST00000541782 248 ntBASIC5.79□□□□□ -1.48
CHD2O14647 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.79□□□□□ -1.48
CHD2O14647 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD2O14647 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.79□□□□□ -1.48
CHD2O14647 AC073346.2-201ENST00000624724 2058 ntBASIC5.79□□□□□ -1.48
CHD2O14647 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD2O14647 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CHD2O14647 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.79□□□□□ -1.48
CHD2O14647 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CHD2O14647 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CHD2O14647 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHD2O14647 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CHD2O14647 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CHD2O14647 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD2O14647 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 AL159169.3-201ENST00000608871 561 ntBASIC5.78□□□□□ -1.48
CHD2O14647 MIR8069-1-201ENST00000616627 86 ntBASIC5.78□□□□□ -1.48
CHD2O14647 MIR8069-2-201ENST00000621412 86 ntBASIC5.78□□□□□ -1.48
CHD2O14647 AL034408.1-202ENST00000636088 415 ntBASIC5.78□□□□□ -1.48
CHD2O14647 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.78□□□□□ -1.48
CHD2O14647 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD2O14647 MIR218-2-201ENST00000385006 110 ntBASIC5.78□□□□□ -1.48
CHD2O14647 CYCSP10-201ENST00000417973 294 ntBASIC5.78□□□□□ -1.48
CHD2O14647 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD2O14647 AL451050.1-201ENST00000450126 415 ntBASIC5.78□□□□□ -1.48
CHD2O14647 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.78□□□□□ -1.48
CHD2O14647 RPL7P1-201ENST00000468161 747 ntBASIC5.78□□□□□ -1.48
CHD2O14647 AC018635.1-201ENST00000468292 1030 ntBASIC5.78□□□□□ -1.48
CHD2O14647 RPL7P9-201ENST00000468715 747 ntBASIC5.78□□□□□ -1.48
CHD2O14647 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD2O14647 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD2O14647 AC074250.1-201ENST00000511117 192 ntBASIC5.78□□□□□ -1.48
CHD2O14647 AC138938.1-201ENST00000515431 782 ntBASIC5.78□□□□□ -1.48
CHD2O14647 RNU1-95P-201ENST00000516357 160 ntBASIC5.78□□□□□ -1.48
CHD2O14647 RNU1-128P-201ENST00000516704 160 ntBASIC5.78□□□□□ -1.48
CHD2O14647 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD2O14647 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 AP001002.1-201ENST00000625148 1513 ntBASIC5.78□□□□□ -1.48
CHD2O14647 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD2O14647 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.78□□□□□ -1.48
CHD2O14647 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CHD2O14647 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD2O14647 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.77□□□□□ -1.49
CHD2O14647 SYF2P2-201ENST00000417620 583 ntBASIC5.77□□□□□ -1.49
CHD2O14647 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD2O14647 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD2O14647 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 KRT19P6-201ENST00000510983 209 ntBASIC5.77□□□□□ -1.49
CHD2O14647 AC027455.1-201ENST00000574104 594 ntBASIC5.77□□□□□ -1.49
CHD2O14647 AC114878.2-201ENST00000604863 1251 ntBASIC5.77□□□□□ -1.49
CHD2O14647 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD2O14647 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CHD2O14647 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 AC093591.2-201ENST00000565254 3843 ntBASIC5.77□□□□□ -1.49
CHD2O14647 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD2O14647 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD2O14647 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD2O14647 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHD2O14647 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CHD2O14647 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD2O14647 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD2O14647 RNU1-83P-201ENST00000363426 164 ntBASIC5.76□□□□□ -1.49
CHD2O14647 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CHD2O14647 AC007066.1-201ENST00000392902 381 ntBASIC5.76□□□□□ -1.49
CHD2O14647 AC007068.1-201ENST00000396690 844 ntBASIC5.76□□□□□ -1.49
CHD2O14647 AL159987.2-201ENST00000432754 307 ntBASIC5.76□□□□□ -1.49
CHD2O14647 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD2O14647 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms