Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNA5SP267-201ENST00000364893 126 ntBASIC7.35□□□□□ -1.23
CUX2O14529 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.35□□□□□ -1.23
CUX2O14529 RNA5SP36-201ENST00000410197 133 ntBASIC7.35□□□□□ -1.23
CUX2O14529 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.35□□□□□ -1.23
CUX2O14529 RPL37P3-201ENST00000456825 293 ntBASIC7.35□□□□□ -1.23
CUX2O14529 RPS27AP17-201ENST00000463344 455 ntBASIC7.35□□□□□ -1.23
CUX2O14529 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.35□□□□□ -1.23
CUX2O14529 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.35□□□□□ -1.23
CUX2O14529 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.35□□□□□ -1.23
CUX2O14529 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CUX2O14529 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CUX2O14529 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CUX2O14529 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC7.34□□□□□ -1.23
CUX2O14529 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CUX2O14529 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC7.34□□□□□ -1.23
CUX2O14529 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CUX2O14529 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CUX2O14529 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CUX2O14529 A2MP1-204ENST00000566278 4130 ntBASIC7.34□□□□□ -1.23
CUX2O14529 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CUX2O14529 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CUX2O14529 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CUX2O14529 AL158156.1-201ENST00000422509 473 ntBASIC7.34□□□□□ -1.23
CUX2O14529 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC7.34□□□□□ -1.23
CUX2O14529 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC7.34□□□□□ -1.23
CUX2O14529 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.34□□□□□ -1.23
CUX2O14529 AC090686.1-201ENST00000481577 749 ntBASIC7.34□□□□□ -1.23
CUX2O14529 AC110792.1-201ENST00000491826 472 ntBASIC7.34□□□□□ -1.23
CUX2O14529 PGBD4P4-201ENST00000509673 613 ntBASIC7.34□□□□□ -1.23
CUX2O14529 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.34□□□□□ -1.23
CUX2O14529 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.34□□□□□ -1.23
CUX2O14529 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.34□□□□□ -1.23
CUX2O14529 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.34□□□□□ -1.23
CUX2O14529 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
CUX2O14529 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
CUX2O14529 ZNF402P-201ENST00000404435 3100 ntBASIC7.34□□□□□ -1.24
CUX2O14529 AC006971.1-201ENST00000407916 4486 ntBASIC7.33□□□□□ -1.24
CUX2O14529 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CUX2O14529 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.33□□□□□ -1.24
CUX2O14529 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.33□□□□□ -1.24
CUX2O14529 U3.26-201ENST00000391236 204 ntBASIC7.33□□□□□ -1.24
CUX2O14529 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CUX2O14529 AC004938.1-201ENST00000438468 308 ntBASIC7.33□□□□□ -1.24
CUX2O14529 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.33□□□□□ -1.24
CUX2O14529 BX510359.1-201ENST00000456973 237 ntBASIC7.33□□□□□ -1.24
CUX2O14529 AC017015.1-201ENST00000477387 286 ntBASIC7.33□□□□□ -1.24
CUX2O14529 HMGN1P15-201ENST00000513870 295 ntBASIC7.33□□□□□ -1.24
CUX2O14529 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.33□□□□□ -1.24
CUX2O14529 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.33□□□□□ -1.24
CUX2O14529 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.33□□□□□ -1.24
CUX2O14529 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.33□□□□□ -1.24
CUX2O14529 AC010503.3-201ENST00000594355 540 ntBASIC7.33□□□□□ -1.24
CUX2O14529 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC7.33□□□□□ -1.24
CUX2O14529 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUX2O14529 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CUX2O14529 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CUX2O14529 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUX2O14529 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
CUX2O14529 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CUX2O14529 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC7.33□□□□□ -1.24
CUX2O14529 PRO1804-201ENST00000623780 2050 ntBASIC7.32□□□□□ -1.24
CUX2O14529 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC7.32□□□□□ -1.24
CUX2O14529 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUX2O14529 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC7.32□□□□□ -1.24
CUX2O14529 RNU4-6P-201ENST00000410804 122 ntBASIC7.32□□□□□ -1.24
CUX2O14529 RPS29P4-201ENST00000414733 161 ntBASIC7.32□□□□□ -1.24
CUX2O14529 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.32□□□□□ -1.24
CUX2O14529 MTND6P6-201ENST00000478031 263 ntBASIC7.32□□□□□ -1.24
CUX2O14529 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.32□□□□□ -1.24
CUX2O14529 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.32□□□□□ -1.24
CUX2O14529 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.32□□□□□ -1.24
CUX2O14529 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC7.32□□□□□ -1.24
CUX2O14529 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.32□□□□□ -1.24
CUX2O14529 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.32□□□□□ -1.24
CUX2O14529 MIR6715A-201ENST00000615929 79 ntBASIC7.32□□□□□ -1.24
CUX2O14529 AL359757.2-201ENST00000624309 274 ntBASIC7.32□□□□□ -1.24
CUX2O14529 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUX2O14529 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CUX2O14529 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUX2O14529 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CUX2O14529 AC139769.1-204ENST00000472297 1931 ntBASIC7.32□□□□□ -1.24
CUX2O14529 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CUX2O14529 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUX2O14529 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
CUX2O14529 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CUX2O14529 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.31□□□□□ -1.24
CUX2O14529 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC7.31□□□□□ -1.24
CUX2O14529 AC233982.1-201ENST00000451247 436 ntBASIC7.31□□□□□ -1.24
CUX2O14529 HSPD1P15-201ENST00000505573 1122 ntBASIC7.31□□□□□ -1.24
CUX2O14529 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC7.31□□□□□ -1.24
CUX2O14529 RPL7L1P13-201ENST00000511702 739 ntBASIC7.31□□□□□ -1.24
CUX2O14529 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC7.31□□□□□ -1.24
CUX2O14529 AL592436.1-201ENST00000605135 558 ntBASIC7.31□□□□□ -1.24
CUX2O14529 AC011816.2-201ENST00000607089 556 ntBASIC7.31□□□□□ -1.24
CUX2O14529 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
CUX2O14529 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUX2O14529 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CUX2O14529 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC7.31□□□□□ -1.24
CUX2O14529 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms