Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC006539.3-201ENST00000454258 129 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 HMGB3P30-201ENST00000457863 606 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RN7SL790P-201ENST00000474043 298 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RPS27AP16-201ENST00000492222 470 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 PGAM1P13-201ENST00000507497 754 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC114781.3-201ENST00000512083 142 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP373-201ENST00000517271 95 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC133555.2-201ENST00000550213 292 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TRAV37-201ENST00000553906 342 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC015720.2-201ENST00000567709 334 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR4502-201ENST00000580432 81 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 EIF1P6-201ENST00000600054 334 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 PSMA6P4-201ENST00000603247 718 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC023762.1-201ENST00000603280 584 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC115621.1-201ENST00000604653 858 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC100767.2-201ENST00000604840 693 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AL365400.2-201ENST00000605604 902 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 DCAF13P3-201ENST00000561147 1334 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 AC108467.2-201ENST00000617640 1597 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 CR381670.1-201ENST00000624291 1693 ntBASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHKB-CPT1BH3BT56 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 ZFRP1-201ENST00000457579 2970 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RNA5SP335-201ENST00000363817 110 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 MIR1911-201ENST00000410783 80 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL34P3-201ENST00000421454 338 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CDY14P-201ENST00000431260 1014 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CYCSP11-201ENST00000436426 315 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RPS13P2-201ENST00000437890 455 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AL512637.1-201ENST00000439523 1231 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CDY12P-201ENST00000440679 1015 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC245047.2-201ENST00000441060 530 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CDY13P-201ENST00000445813 1015 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CDY23P-201ENST00000451661 1014 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC006463.2-201ENST00000473326 348 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RPS4XP22-201ENST00000480755 780 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC092185.1-201ENST00000491371 97 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RPL5P23-201ENST00000496040 868 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 OR5H7P-201ENST00000514084 930 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 RNU2-58P-201ENST00000516403 183 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 CYCSP22-201ENST00000517555 339 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AP006437.1-202ENST00000530327 933 ntBASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CHKB-CPT1BH3BT56 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms