Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.33■□□□□ 0.53
GPC6Q9Y625 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC6Q9Y625 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC6Q9Y625 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC6Q9Y625 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GPC6Q9Y625 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.33■□□□□ 0.53
GPC6Q9Y625 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC6Q9Y625 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC6Q9Y625 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC6Q9Y625 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC6Q9Y625 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.33■□□□□ 0.52
GPC6Q9Y625 AC073210.2-201ENST00000430369 194 ntBASIC18.33■□□□□ 0.52
GPC6Q9Y625 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 AC142086.2-201ENST00000569753 217 ntBASIC18.33■□□□□ 0.52
GPC6Q9Y625 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC6Q9Y625 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC6Q9Y625 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 DUSP5P2-201ENST00000426873 1033 ntBASIC18.32■□□□□ 0.52
GPC6Q9Y625 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 AC133041.1-202ENST00000642053 222 ntBASIC18.32■□□□□ 0.52
GPC6Q9Y625 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.32■□□□□ 0.52
GPC6Q9Y625 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GPC6Q9Y625 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 AC091874.3-201ENST00000512672 1195 ntBASIC18.31■□□□□ 0.52
GPC6Q9Y625 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 AL138781.1-201ENST00000566567 1274 ntBASIC18.31■□□□□ 0.52
GPC6Q9Y625 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.31■□□□□ 0.52
GPC6Q9Y625 Z82202.1-201ENST00000623446 1880 ntBASIC18.31■□□□□ 0.52
GPC6Q9Y625 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPC6Q9Y625 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms