Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
RTCBQ9Y3I0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RTCBQ9Y3I0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RTCBQ9Y3I0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 SPDYE15P-201ENST00000424157 909 ntBASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.53■■□□□ 1.52
RTCBQ9Y3I0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 KRT8P11-201ENST00000409686 1436 ntBASIC24.52■■□□□ 1.52
RTCBQ9Y3I0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 AC133561.1-201ENST00000568600 2415 ntBASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 NPAP1P7-201ENST00000613027 823 ntBASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 FEM1AP1-201ENST00000431297 1995 ntBASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
RTCBQ9Y3I0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 TSPY21P-201ENST00000433481 731 ntBASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 TSPY23P-201ENST00000440136 739 ntBASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 SPDYE13P-201ENST00000445314 798 ntBASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.5■■□□□ 1.51
RTCBQ9Y3I0 AC079834.2-201ENST00000609776 1949 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms