Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
GNEQ9Y223 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
GNEQ9Y223 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.67■■□□□ 1.06
GNEQ9Y223 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.67■■□□□ 1.06
GNEQ9Y223 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
GNEQ9Y223 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GNEQ9Y223 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GNEQ9Y223 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.67■■□□□ 1.06
GNEQ9Y223 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.67■■□□□ 1.06
GNEQ9Y223 HOMER2P1-201ENST00000455653 964 ntBASIC21.67■■□□□ 1.06
GNEQ9Y223 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.67■■□□□ 1.06
GNEQ9Y223 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.67■■□□□ 1.06
GNEQ9Y223 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
GNEQ9Y223 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.67■■□□□ 1.06
GNEQ9Y223 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.67■■□□□ 1.06
GNEQ9Y223 AL121956.5-201ENST00000625261 221 ntBASIC21.67■■□□□ 1.06
GNEQ9Y223 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
GNEQ9Y223 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GNEQ9Y223 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.66■■□□□ 1.06
GNEQ9Y223 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
GNEQ9Y223 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GNEQ9Y223 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GNEQ9Y223 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.66■■□□□ 1.06
GNEQ9Y223 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GNEQ9Y223 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.66■■□□□ 1.06
GNEQ9Y223 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GNEQ9Y223 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GNEQ9Y223 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.66■■□□□ 1.06
GNEQ9Y223 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.66■■□□□ 1.06
GNEQ9Y223 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.66■■□□□ 1.06
GNEQ9Y223 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GNEQ9Y223 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.66■■□□□ 1.06
GNEQ9Y223 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.66■■□□□ 1.06
GNEQ9Y223 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.66■■□□□ 1.06
GNEQ9Y223 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.66■■□□□ 1.06
GNEQ9Y223 AL023973.1-201ENST00000624619 620 ntBASIC21.66■■□□□ 1.06
GNEQ9Y223 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GNEQ9Y223 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GNEQ9Y223 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 AL691432.2-201ENST00000607222 2038 ntBASIC21.65■■□□□ 1.06
GNEQ9Y223 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.65■■□□□ 1.06
GNEQ9Y223 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
GNEQ9Y223 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GNEQ9Y223 AC009237.14-201ENST00000609975 1594 ntBASIC21.65■■□□□ 1.06
GNEQ9Y223 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.65■■□□□ 1.06
GNEQ9Y223 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
GNEQ9Y223 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
GNEQ9Y223 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.64■■□□□ 1.05
GNEQ9Y223 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.64■■□□□ 1.05
GNEQ9Y223 PCED1CP-201ENST00000419887 785 ntBASIC21.64■■□□□ 1.05
GNEQ9Y223 AC009947.2-201ENST00000444014 672 ntBASIC21.64■■□□□ 1.05
GNEQ9Y223 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
GNEQ9Y223 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.64■■□□□ 1.05
GNEQ9Y223 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GNEQ9Y223 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.64■■□□□ 1.05
GNEQ9Y223 AC008622.2-201ENST00000617006 1229 ntBASIC21.64■■□□□ 1.05
GNEQ9Y223 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.64■■□□□ 1.05
GNEQ9Y223 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
GNEQ9Y223 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GNEQ9Y223 AC073314.1-201ENST00000568729 2216 ntBASIC21.64■■□□□ 1.05
GNEQ9Y223 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.64■■□□□ 1.05
GNEQ9Y223 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GNEQ9Y223 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GNEQ9Y223 KRT8P45-201ENST00000414328 1447 ntBASIC21.63■■□□□ 1.05
GNEQ9Y223 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GNEQ9Y223 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GNEQ9Y223 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.63■■□□□ 1.05
GNEQ9Y223 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GNEQ9Y223 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GNEQ9Y223 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.63■■□□□ 1.05
GNEQ9Y223 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
GNEQ9Y223 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.63■■□□□ 1.05
GNEQ9Y223 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GNEQ9Y223 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GNEQ9Y223 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GNEQ9Y223 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GNEQ9Y223 KRT8P11-201ENST00000409686 1436 ntBASIC21.63■■□□□ 1.05
GNEQ9Y223 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms