Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 TEX21P-204ENST00000641479 1693 ntBASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 MIR663A-201ENST00000385250 93 ntBASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHMP2BQ9UQN3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 AC020763.4-201ENST00000623414 4170 ntBASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 AL390719.1-204ENST00000412397 1219 ntBASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 CDCA4P2-201ENST00000441182 718 ntBASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP2BQ9UQN3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 AC124283.5-201ENST00000624661 1809 ntBASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP2BQ9UQN3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 LETM1P2-201ENST00000597330 2178 ntBASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms