Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.02■■□□□ 1.12
COL20A1Q9P218 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.02■■□□□ 1.12
COL20A1Q9P218 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL20A1Q9P218 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
COL20A1Q9P218 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.02■■□□□ 1.11
COL20A1Q9P218 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
COL20A1Q9P218 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL20A1Q9P218 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
COL20A1Q9P218 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22■■□□□ 1.11
COL20A1Q9P218 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22■■□□□ 1.11
COL20A1Q9P218 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL20A1Q9P218 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL20A1Q9P218 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22■■□□□ 1.11
COL20A1Q9P218 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22■■□□□ 1.11
COL20A1Q9P218 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22■■□□□ 1.11
COL20A1Q9P218 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22■■□□□ 1.11
COL20A1Q9P218 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL20A1Q9P218 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL20A1Q9P218 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL20A1Q9P218 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL20A1Q9P218 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
COL20A1Q9P218 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL20A1Q9P218 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL20A1Q9P218 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.99■■□□□ 1.11
COL20A1Q9P218 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 AL137013.1-201ENST00000432946 1228 ntBASIC21.99■■□□□ 1.11
COL20A1Q9P218 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 PCDHAC2-203ENST00000615316 3011 ntBASIC21.99■■□□□ 1.11
COL20A1Q9P218 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.99■■□□□ 1.11
COL20A1Q9P218 AC104417.2-201ENST00000562989 1793 ntBASIC21.99■■□□□ 1.11
COL20A1Q9P218 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL20A1Q9P218 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL20A1Q9P218 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL20A1Q9P218 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL20A1Q9P218 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL20A1Q9P218 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.98■■□□□ 1.11
COL20A1Q9P218 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms