Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 AL032819.2-201ENST00000624543 2162 ntBASIC19.77■□□□□ 0.76
UBP1Q9NZI7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 AC073648.6-201ENST00000641589 218 ntBASIC19.77■□□□□ 0.76
UBP1Q9NZI7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.77■□□□□ 0.76
UBP1Q9NZI7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 TSPY20P-201ENST00000450910 630 ntBASIC19.76■□□□□ 0.75
UBP1Q9NZI7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
UBP1Q9NZI7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 NBPF21P-201ENST00000425093 1451 ntBASIC19.75■□□□□ 0.75
UBP1Q9NZI7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 POU5F1P3-201ENST00000428824 1078 ntBASIC19.75■□□□□ 0.75
UBP1Q9NZI7 TUBB8P6-201ENST00000436895 1288 ntBASIC19.75■□□□□ 0.75
UBP1Q9NZI7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 KRT18P16-201ENST00000510337 1294 ntBASIC19.75■□□□□ 0.75
UBP1Q9NZI7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UBP1Q9NZI7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 AC128676.1-201ENST00000454392 318 ntBASIC19.74■□□□□ 0.75
UBP1Q9NZI7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms