Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 AC133041.1-202ENST00000642053 222 ntBASIC17.53■□□□□ 0.4
HINT3Q9NQE9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HINT3Q9NQE9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 TEX21P-204ENST00000641479 1693 ntBASIC17.52■□□□□ 0.4
HINT3Q9NQE9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.52■□□□□ 0.4
HINT3Q9NQE9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HINT3Q9NQE9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HINT3Q9NQE9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HINT3Q9NQE9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
HINT3Q9NQE9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.52■□□□□ 0.39
HINT3Q9NQE9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.52■□□□□ 0.39
HINT3Q9NQE9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 LSM12P1-201ENST00000411836 588 ntBASIC17.51■□□□□ 0.39
HINT3Q9NQE9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 AC073210.2-201ENST00000430369 194 ntBASIC17.51■□□□□ 0.39
HINT3Q9NQE9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 AC069152.1-201ENST00000438030 544 ntBASIC17.51■□□□□ 0.39
HINT3Q9NQE9 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 AC092118.2-201ENST00000613495 667 ntBASIC17.51■□□□□ 0.39
HINT3Q9NQE9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.51■□□□□ 0.39
HINT3Q9NQE9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 AC141586.3-201ENST00000562166 1838 ntBASIC17.5■□□□□ 0.39
HINT3Q9NQE9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.5■□□□□ 0.39
HINT3Q9NQE9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms