Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 POU5F1P3-201ENST00000428824 1078 ntBASIC17.85■□□□□ 0.45
TRIM2Q9C040 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 AC124283.5-201ENST00000624661 1809 ntBASIC17.85■□□□□ 0.45
TRIM2Q9C040 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM2Q9C040 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM2Q9C040 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TRIM2Q9C040 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM2Q9C040 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM2Q9C040 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.84■□□□□ 0.45
TRIM2Q9C040 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM2Q9C040 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM2Q9C040 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM2Q9C040 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM2Q9C040 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM2Q9C040 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM2Q9C040 AP006587.1-201ENST00000534129 1502 ntBASIC17.83■□□□□ 0.45
TRIM2Q9C040 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM2Q9C040 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM2Q9C040 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM2Q9C040 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM2Q9C040 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 AC120498.8-201ENST00000614275 531 ntBASIC17.83■□□□□ 0.44
TRIM2Q9C040 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM2Q9C040 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM2Q9C040 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 YBX1P10-201ENST00000444752 975 ntBASIC17.82■□□□□ 0.44
TRIM2Q9C040 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 ITM2C-210ENST00000620962 501 ntBASIC17.82■□□□□ 0.44
TRIM2Q9C040 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM2Q9C040 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM2Q9C040 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms