Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 KRT18P31-201ENST00000506277 1292 ntBASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 FOSL1P1-201ENST00000511041 816 ntBASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 TERC-201ENST00000602385 541 ntBASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 AC055717.3-201ENST00000622967 595 ntBASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CNTNAP3Q9BZ76 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 SPDYE15P-201ENST00000424157 909 ntBASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 AC011498.5-201ENST00000592027 486 ntBASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CNTNAP3Q9BZ76 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 AP000523.1-201ENST00000398242 1049 ntBASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 MIR940-201ENST00000401276 94 ntBASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 RASA4DP-201ENST00000460726 1199 ntBASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 HLA-J-202ENST00000469281 1241 ntBASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CNTNAP3Q9BZ76 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 SLC25A24-204ENST00000569674 2357 ntBASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 GCSHP2-201ENST00000560971 527 ntBASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CNTNAP3Q9BZ76 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 HLA-G-202ENST00000376815 851 ntBASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNTNAP3Q9BZ76 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms