Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 TUBB8P6-201ENST00000436895 1288 ntBASIC14.34□□□□□ -0.11
ODF3Q96PU9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 AC008687.6-201ENST00000596318 630 ntBASIC14.34□□□□□ -0.11
ODF3Q96PU9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.34□□□□□ -0.11
ODF3Q96PU9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ODF3Q96PU9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ODF3Q96PU9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ODF3Q96PU9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
ODF3Q96PU9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
ODF3Q96PU9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ODF3Q96PU9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC142086.2-201ENST00000569753 217 ntBASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 SOX15-203ENST00000570788 1093 ntBASIC14.33□□□□□ -0.12
ODF3Q96PU9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AL109923.1-201ENST00000618799 583 ntBASIC14.33□□□□□ -0.12
ODF3Q96PU9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC098818.2-201ENST00000564925 2320 ntBASIC14.33□□□□□ -0.12
ODF3Q96PU9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.33□□□□□ -0.12
ODF3Q96PU9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ODF3Q96PU9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ODF3Q96PU9 AIRN-201ENST00000601203 4374 ntBASIC14.32□□□□□ -0.12
ODF3Q96PU9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ODF3Q96PU9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 AC104417.2-201ENST00000562989 1793 ntBASIC14.32□□□□□ -0.12
ODF3Q96PU9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
ODF3Q96PU9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ODF3Q96PU9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ODF3Q96PU9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ODF3Q96PU9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.32□□□□□ -0.12
ODF3Q96PU9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms