Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 TSSC2-201ENST00000450217 709 ntBASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 AC092720.2-201ENST00000602388 1665 ntBASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM43Q96BQ3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM43Q96BQ3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM43Q96BQ3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 AP002383.4-201ENST00000442518 975 ntBASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM43Q96BQ3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 MIR4674-201ENST00000582457 87 ntBASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM43Q96BQ3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 AC011498.5-201ENST00000592027 486 ntBASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 AC007225.1-201ENST00000566331 1836 ntBASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM43Q96BQ3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 KRT8P11-201ENST00000409686 1436 ntBASIC21.11■□□□□ 0.97
TRIM43Q96BQ3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 BX119927.1-201ENST00000636596 1552 ntBASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 EMBP1-201ENST00000458200 901 ntBASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 RASA4DP-201ENST00000460726 1199 ntBASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms