Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 AC239809.2-201ENST00000415381 517 ntBASIC19.65■□□□□ 0.74
PTCD2Q8WV60 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCD2Q8WV60 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTCD2Q8WV60 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTCD2Q8WV60 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTCD2Q8WV60 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTCD2Q8WV60 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 AL596275.1-201ENST00000423464 877 ntBASIC19.64■□□□□ 0.73
PTCD2Q8WV60 YBX1P10-201ENST00000444752 975 ntBASIC19.64■□□□□ 0.73
PTCD2Q8WV60 UBE2SP1-201ENST00000450587 669 ntBASIC19.64■□□□□ 0.73
PTCD2Q8WV60 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 AC008550.1-201ENST00000511500 884 ntBASIC19.64■□□□□ 0.73
PTCD2Q8WV60 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 AL032819.2-201ENST00000624543 2162 ntBASIC19.64■□□□□ 0.73
PTCD2Q8WV60 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCD2Q8WV60 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AC018445.3-201ENST00000624177 1945 ntBASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AP006587.1-201ENST00000534129 1502 ntBASIC19.63■□□□□ 0.73
PTCD2Q8WV60 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AC133681.1-201ENST00000465482 601 ntBASIC19.63■□□□□ 0.73
PTCD2Q8WV60 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 Z99916.2-201ENST00000604037 246 ntBASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AL121829.2-201ENST00000620908 328 ntBASIC19.63■□□□□ 0.73
PTCD2Q8WV60 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCD2Q8WV60 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTCD2Q8WV60 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms