Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 FAM201B-201ENST00000458407 597 ntBASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 AL023875.1-201ENST00000640777 796 ntBASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 AP006587.1-201ENST00000534129 1502 ntBASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SIMC1Q8NDZ2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 AC093484.2-201ENST00000580996 2166 ntBASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIMC1Q8NDZ2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.27■□□□□ 0.51
SIMC1Q8NDZ2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 AC098818.2-201ENST00000564925 2320 ntBASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIMC1Q8NDZ2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 Z82202.1-201ENST00000623446 1880 ntBASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms