Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 AC005082.1-201ENST00000413042 2259 ntBASIC18.96■□□□□ 0.63
CPSF7Q8N684 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CPSF7Q8N684 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPSF7Q8N684 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 AL161938.1-201ENST00000569833 2180 ntBASIC18.95■□□□□ 0.62
CPSF7Q8N684 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 PHGDH-210ENST00000641115 1638 ntBASIC18.95■□□□□ 0.62
CPSF7Q8N684 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
CPSF7Q8N684 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF7Q8N684 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 LETM1P2-201ENST00000597330 2178 ntBASIC18.94■□□□□ 0.62
CPSF7Q8N684 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF7Q8N684 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CPSF7Q8N684 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 AC079598.2-202ENST00000546624 1451 ntBASIC18.93■□□□□ 0.62
CPSF7Q8N684 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.93■□□□□ 0.62
CPSF7Q8N684 FAM201B-201ENST00000458407 597 ntBASIC18.93■□□□□ 0.62
CPSF7Q8N684 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF7Q8N684 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms