Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC006128.1-201ENST00000624704 1661 ntBASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNPOQ8N3V7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 TMEM179-206ENST00000616017 1645 ntBASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNPOQ8N3V7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 FEM1AP1-201ENST00000431297 1995 ntBASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 AC009947.2-201ENST00000444014 672 ntBASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 Z85996.1-201ENST00000494644 937 ntBASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 KRT8P8-201ENST00000434750 1448 ntBASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNPOQ8N3V7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 AC007225.1-201ENST00000566331 1836 ntBASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 AC011558.1-201ENST00000623459 338 ntBASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 LINC01006-201ENST00000333319 2292 ntBASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNPOQ8N3V7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms