Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC004870.1-201ENST00000315132 882 ntBASIC28.91■■■□□ 2.22
ABCA6Q8N139 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC28.91■■■□□ 2.22
ABCA6Q8N139 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC28.91■■■□□ 2.22
ABCA6Q8N139 FEM1AP1-201ENST00000431297 1995 ntBASIC28.91■■■□□ 2.22
ABCA6Q8N139 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC28.91■■■□□ 2.22
ABCA6Q8N139 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ABCA6Q8N139 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ABCA6Q8N139 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC28.91■■■□□ 2.22
ABCA6Q8N139 AL031008.1-201ENST00000619963 541 ntBASIC28.91■■■□□ 2.22
ABCA6Q8N139 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
ABCA6Q8N139 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC28.9■■■□□ 2.22
ABCA6Q8N139 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC28.9■■■□□ 2.22
ABCA6Q8N139 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ABCA6Q8N139 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ABCA6Q8N139 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
ABCA6Q8N139 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC28.9■■■□□ 2.22
ABCA6Q8N139 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
ABCA6Q8N139 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ABCA6Q8N139 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC28.9■■■□□ 2.22
ABCA6Q8N139 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC28.9■■■□□ 2.22
ABCA6Q8N139 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ABCA6Q8N139 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ABCA6Q8N139 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ABCA6Q8N139 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC28.89■■■□□ 2.22
ABCA6Q8N139 AP002383.4-201ENST00000442518 975 ntBASIC28.89■■■□□ 2.22
ABCA6Q8N139 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
ABCA6Q8N139 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC28.89■■■□□ 2.22
ABCA6Q8N139 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
ABCA6Q8N139 AP001271.2-201ENST00000624018 1556 ntBASIC28.89■■■□□ 2.21
ABCA6Q8N139 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.21
ABCA6Q8N139 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
ABCA6Q8N139 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ABCA6Q8N139 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC28.88■■■□□ 2.21
ABCA6Q8N139 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
ABCA6Q8N139 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
ABCA6Q8N139 AF106564.1-201ENST00000607058 2553 ntBASIC28.88■■■□□ 2.21
ABCA6Q8N139 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC28.88■■■□□ 2.21
ABCA6Q8N139 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ABCA6Q8N139 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ABCA6Q8N139 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC28.88■■■□□ 2.21
ABCA6Q8N139 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 AC092597.1-201ENST00000487352 616 ntBASIC28.87■■■□□ 2.21
ABCA6Q8N139 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ABCA6Q8N139 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ABCA6Q8N139 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
ABCA6Q8N139 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ABCA6Q8N139 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ABCA6Q8N139 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC28.86■■■□□ 2.21
ABCA6Q8N139 MOK-225ENST00000522867 1883 ntTSL 5 BASIC28.86■■■□□ 2.21
ABCA6Q8N139 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCA6Q8N139 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC28.86■■■□□ 2.21
ABCA6Q8N139 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ABCA6Q8N139 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCA6Q8N139 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCA6Q8N139 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC28.86■■■□□ 2.21
ABCA6Q8N139 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC28.86■■■□□ 2.21
ABCA6Q8N139 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ABCA6Q8N139 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 AC009078.2-202ENST00000463353 338 ntBASIC28.85■■■□□ 2.21
ABCA6Q8N139 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ABCA6Q8N139 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC28.85■■■□□ 2.21
ABCA6Q8N139 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 AL845331.1-201ENST00000424978 1190 ntBASIC28.84■■■□□ 2.21
ABCA6Q8N139 AC079781.3-201ENST00000449110 356 ntBASIC28.84■■■□□ 2.21
ABCA6Q8N139 RASA4DP-201ENST00000460726 1199 ntBASIC28.84■■■□□ 2.21
ABCA6Q8N139 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 AC092329.2-201ENST00000598402 547 ntBASIC28.84■■■□□ 2.21
ABCA6Q8N139 AL732292.2-201ENST00000609649 430 ntBASIC28.84■■■□□ 2.21
ABCA6Q8N139 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ABCA6Q8N139 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC28.84■■■□□ 2.21
ABCA6Q8N139 FAAHP1-202ENST00000446499 1238 ntBASIC28.83■■■□□ 2.21
ABCA6Q8N139 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC28.83■■■□□ 2.21
ABCA6Q8N139 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC28.83■■■□□ 2.21
ABCA6Q8N139 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.83■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms