Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 AC140113.3-201ENST00000605663 199 ntBASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
TMEFF1Q8IYR6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 AL023973.1-201ENST00000624619 620 ntBASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 AL121956.5-201ENST00000625261 221 ntBASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 AL031432.5-201ENST00000641059 760 ntBASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 IER3-202ENST00000376377 1350 ntBASIC19.31■□□□□ 0.68
TMEFF1Q8IYR6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 KRT18P48-201ENST00000434763 852 ntBASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 AL512604.3-201ENST00000569583 964 ntBASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEFF1Q8IYR6 LINC01465-201ENST00000408887 1940 ntBASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 HOMER2P1-201ENST00000455653 964 ntBASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 AL160286.2-201ENST00000567150 934 ntBASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEFF1Q8IYR6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEFF1Q8IYR6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms