Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.45■□□□□ 0.86
SCUBE3Q8IX30 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.44■□□□□ 0.86
SCUBE3Q8IX30 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 AC007952.6-201ENST00000573168 2673 ntBASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 AC003957.1-201ENST00000625108 2673 ntBASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 LINC01465-201ENST00000408887 1940 ntBASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 RARRES2P10-201ENST00000564312 460 ntBASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SCUBE3Q8IX30 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 AC093484.2-201ENST00000580996 2166 ntBASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 AF186192.3-201ENST00000583427 947 ntBASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCUBE3Q8IX30 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 AP002982.1-201ENST00000492365 877 ntBASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 Z99916.2-201ENST00000604037 246 ntBASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 HLA-A-209ENST00000638375 975 ntBASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.41■□□□□ 0.86
SCUBE3Q8IX30 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms