Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNKSR3Q6P9H4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CNKSR3Q6P9H4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 HYMAI.1-201ENST00000620949 238 ntBASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 LINC01311-201ENST00000565162 1445 ntBASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
CNKSR3Q6P9H4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 GCSHP2-201ENST00000560971 527 ntBASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 AL691432.3-201ENST00000621860 400 ntBASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 KRT8P11-201ENST00000409686 1436 ntBASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CNKSR3Q6P9H4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNKSR3Q6P9H4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 ATP5G2P1-201ENST00000433580 426 ntBASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 AC026310.3-201ENST00000625186 2373 ntBASIC20.92■□□□□ 0.94
CNKSR3Q6P9H4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.91■□□□□ 0.94
CNKSR3Q6P9H4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms