Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 RARRES2P10-201ENST00000564312 460 ntBASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC144NLQ6NUI1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 AC098590.1-201ENST00000468126 897 ntBASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 C1QL1P1-201ENST00000568105 661 ntBASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 AP001412.1-201ENST00000608405 714 ntBASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC144NLQ6NUI1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 AC073130.3-201ENST00000624389 2278 ntBASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 AP002982.1-201ENST00000492365 877 ntBASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CCDC144NLQ6NUI1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC144NLQ6NUI1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms