Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIF1Q5T3J3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 AC104417.2-201ENST00000562989 1793 ntBASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 BX276092.2-201ENST00000417668 665 ntBASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 AC022517.1-201ENST00000592429 346 ntBASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.3■□□□□ 0.52
LRIF1Q5T3J3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 AC105036.2-201ENST00000569468 176 ntBASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 AC093525.10-201ENST00000625130 1569 ntBASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIF1Q5T3J3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 AC073111.5-205ENST00000641717 521 ntBASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 SDHAP1-207ENST00000440850 2000 ntBASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.28■□□□□ 0.52
LRIF1Q5T3J3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms