Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 AL160286.2-201ENST00000567150 934 ntBASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 AC073912.3-201ENST00000624414 853 ntBASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
TTC39AQ5SRH9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 MESTP1-201ENST00000404287 994 ntBASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 B3GAT3P1-201ENST00000471720 806 ntBASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 AC011506.1-201ENST00000474329 610 ntBASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 FSCN1P1-201ENST00000568912 1481 ntBASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC39AQ5SRH9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 UNC93B2-201ENST00000285383 730 ntBASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AP000525.1-201ENST00000608286 694 ntBASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC39AQ5SRH9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39AQ5SRH9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC39AQ5SRH9 AC079598.2-202ENST00000546624 1451 ntBASIC23.64■■□□□ 1.38
TTC39AQ5SRH9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.64■■□□□ 1.38
TTC39AQ5SRH9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 RCC2P6-201ENST00000526625 1557 ntBASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.64■■□□□ 1.37
TTC39AQ5SRH9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 Z85996.1-201ENST00000494644 937 ntBASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC39AQ5SRH9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms