Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PRAMEP78395 AL121829.2-201ENST00000620908 328 ntBASIC19.57■□□□□ 0.72
PRAMEP78395 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRAMEP78395 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRAMEP78395 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
PRAMEP78395 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEP78395 AC005332.7-201ENST00000614046 2005 ntBASIC19.56■□□□□ 0.72
PRAMEP78395 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEP78395 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEP78395 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.56■□□□□ 0.72
PRAMEP78395 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.56■□□□□ 0.72
PRAMEP78395 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEP78395 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEP78395 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEP78395 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRAMEP78395 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRAMEP78395 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEP78395 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEP78395 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PRAMEP78395 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.56■□□□□ 0.72
PRAMEP78395 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEP78395 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEP78395 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PRAMEP78395 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
PRAMEP78395 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEP78395 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEP78395 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEP78395 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEP78395 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEP78395 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEP78395 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEP78395 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEP78395 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PRAMEP78395 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEP78395 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEP78395 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEP78395 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEP78395 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PRAMEP78395 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 POM121L13P-201ENST00000422362 380 ntBASIC19.54■□□□□ 0.72
PRAMEP78395 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.54■□□□□ 0.72
PRAMEP78395 YBX1P10-201ENST00000444752 975 ntBASIC19.54■□□□□ 0.72
PRAMEP78395 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEP78395 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEP78395 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEP78395 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEP78395 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEP78395 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEP78395 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEP78395 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEP78395 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEP78395 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEP78395 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.53■□□□□ 0.72
PRAMEP78395 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEP78395 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEP78395 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms