Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB38P57729 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB38P57729 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB38P57729 AC233702.5-201ENST00000584107 538 ntBASIC18.29■□□□□ 0.52
RAB38P57729 AP001412.1-201ENST00000608405 714 ntBASIC18.29■□□□□ 0.52
RAB38P57729 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB38P57729 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB38P57729 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB38P57729 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB38P57729 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB38P57729 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB38P57729 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB38P57729 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB38P57729 SLC25A24-204ENST00000569674 2357 ntBASIC18.28■□□□□ 0.52
RAB38P57729 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB38P57729 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RAB38P57729 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB38P57729 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB38P57729 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB38P57729 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RAB38P57729 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB38P57729 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB38P57729 RPS2P4-201ENST00000476944 856 ntBASIC18.28■□□□□ 0.52
RAB38P57729 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB38P57729 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 Z99916.2-201ENST00000604037 246 ntBASIC18.28■□□□□ 0.52
RAB38P57729 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB38P57729 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB38P57729 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB38P57729 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB38P57729 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RAB38P57729 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.27■□□□□ 0.52
RAB38P57729 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.27■□□□□ 0.52
RAB38P57729 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.27■□□□□ 0.52
RAB38P57729 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RAB38P57729 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAB38P57729 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RAB38P57729 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.27■□□□□ 0.51
RAB38P57729 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAB38P57729 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.27■□□□□ 0.51
RAB38P57729 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAB38P57729 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RAB38P57729 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
RAB38P57729 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 KRT16P1-201ENST00000399124 1418 ntBASIC18.26■□□□□ 0.51
RAB38P57729 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.26■□□□□ 0.51
RAB38P57729 AL160286.2-201ENST00000567150 934 ntBASIC18.26■□□□□ 0.51
RAB38P57729 AC113410.3-201ENST00000623366 203 ntBASIC18.26■□□□□ 0.51
RAB38P57729 CR392000.1-201ENST00000624770 1228 ntBASIC18.26■□□□□ 0.51
RAB38P57729 AL049637.2-201ENST00000641778 930 ntBASIC18.26■□□□□ 0.51
RAB38P57729 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAB38P57729 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 AC104417.2-201ENST00000562989 1793 ntBASIC18.26■□□□□ 0.51
RAB38P57729 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAB38P57729 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.26■□□□□ 0.51
RAB38P57729 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAB38P57729 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms