Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN17P56750 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN17P56750 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN17P56750 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN17P56750 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CLDN17P56750 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN17P56750 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN17P56750 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN17P56750 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN17P56750 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN17P56750 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN17P56750 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN17P56750 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN17P56750 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN17P56750 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN17P56750 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN17P56750 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CLDN17P56750 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN17P56750 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN17P56750 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN17P56750 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN17P56750 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN17P56750 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN17P56750 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN17P56750 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN17P56750 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN17P56750 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN17P56750 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN17P56750 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN17P56750 AC110285.5-201ENST00000611501 352 ntBASIC17.33■□□□□ 0.36
CLDN17P56750 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN17P56750 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLDN17P56750 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN17P56750 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN17P56750 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN17P56750 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLDN17P56750 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 ABHD17AP1-201ENST00000358206 933 ntBASIC17.32■□□□□ 0.36
CLDN17P56750 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 RPPH1-201ENST00000516869 333 ntBASIC17.32■□□□□ 0.36
CLDN17P56750 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN17P56750 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN17P56750 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN17P56750 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN17P56750 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLDN17P56750 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN17P56750 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN17P56750 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN17P56750 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN17P56750 AC133681.1-201ENST00000465482 601 ntBASIC17.31■□□□□ 0.36
CLDN17P56750 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.31■□□□□ 0.36
CLDN17P56750 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN17P56750 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN17P56750 FAM197Y4-202ENST00000622692 608 ntBASIC17.31■□□□□ 0.36
CLDN17P56750 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN17P56750 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN17P56750 AC116562.4-201ENST00000641316 2276 ntBASIC17.31■□□□□ 0.36
CLDN17P56750 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN17P56750 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms