Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CMC4P56277 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.49□□□□□ -0.09
CMC4P56277 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 RPS2P55-201ENST00000397318 883 ntBASIC14.49□□□□□ -0.09
CMC4P56277 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CMC4P56277 NIFKP9-201ENST00000419265 221 ntBASIC14.49□□□□□ -0.09
CMC4P56277 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.49□□□□□ -0.09
CMC4P56277 AC107956.1-201ENST00000494359 873 ntBASIC14.49□□□□□ -0.09
CMC4P56277 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CMC4P56277 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 AF186192.3-201ENST00000583427 947 ntBASIC14.49□□□□□ -0.09
CMC4P56277 AL445675.2-201ENST00000620291 557 ntBASIC14.49□□□□□ -0.09
CMC4P56277 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.49□□□□□ -0.09
CMC4P56277 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.49□□□□□ -0.09
CMC4P56277 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.49□□□□□ -0.09
CMC4P56277 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CMC4P56277 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CMC4P56277 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CMC4P56277 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.48□□□□□ -0.09
CMC4P56277 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.48□□□□□ -0.09
CMC4P56277 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.48□□□□□ -0.09
CMC4P56277 AC008550.1-201ENST00000511500 884 ntBASIC14.48□□□□□ -0.09
CMC4P56277 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.48□□□□□ -0.09
CMC4P56277 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.48□□□□□ -0.09
CMC4P56277 AC233702.5-201ENST00000584107 538 ntBASIC14.48□□□□□ -0.09
CMC4P56277 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.48□□□□□ -0.09
CMC4P56277 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.48□□□□□ -0.09
CMC4P56277 AL031985.4-201ENST00000642138 673 ntBASIC14.48□□□□□ -0.09
CMC4P56277 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CMC4P56277 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.48□□□□□ -0.09
CMC4P56277 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.48□□□□□ -0.09
CMC4P56277 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.48□□□□□ -0.09
CMC4P56277 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CMC4P56277 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CMC4P56277 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CMC4P56277 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 KRT17P2-201ENST00000300992 1314 ntBASIC14.47□□□□□ -0.09
CMC4P56277 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.47□□□□□ -0.09
CMC4P56277 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.47□□□□□ -0.09
CMC4P56277 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.47□□□□□ -0.09
CMC4P56277 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CMC4P56277 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.47□□□□□ -0.09
CMC4P56277 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CMC4P56277 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.47□□□□□ -0.09
CMC4P56277 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CMC4P56277 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.47□□□□□ -0.09
CMC4P56277 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.47□□□□□ -0.09
CMC4P56277 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 KRT16P1-201ENST00000399124 1418 ntBASIC14.47□□□□□ -0.09
CMC4P56277 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CMC4P56277 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CMC4P56277 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms